Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4260g00012 ATGTCGAACGTTATGGCTGCAGAAGAAAAGGGAAAAGTAGAGGCCTATGGATGGGCAGCTAGAGACGCCTCAGGAATCCTCTCACCCTTTCACTTTACTAGAAGGGCAAATGGCGAAAATGACATCACCGTCAAGATTCTCTATTGTGGGATTTGCCATAGCGACCTTCATTTTCTCAAGGATGACTTCGGCATGACCCTGTATCCTGTTGTTCCCGGGCACGAGATCGTGGGCGAAGTGACAAAAGTGGGTCGTGGTGTCTCAAAATTTAGGGTGGGTGACATAGCTGGTGTGCCTGGCCTATGTGGCTCGTGTGGGTCGTGCTCTGAGTGCAACCAGGGTCTTGAAGTGTATTGCCCAAAAATGATATTAACCTTCAGTGCACGAGACCATGACGGATCAGTAACCCAAGGCGGCTACTCCGATAAGATTGTGGTGGACGAGCACTTTGCCGTGGTGATTCCAAGAACTCTGCCACTGGACGGAGCTGCCCCGTTGCTGTGTGCTGGAATCTCAGTATACAGCCCCATGACGAGCCATGGACTGGCTCGTCCTGGTTTGCATTTGGGCGTGGTAGGGCTTGGGGGGCTCGGCCACGTGGCAGTCAAGTTCGCCAAAGCTTTTGAAATGAAAGTGACGGTGATAAGTACTTCTCCCAGCAAGAAGAAGGAAGCATTGGAACGTCTTGGTGCCGATGCCTTCTTAATCAGCAAAGACCAACAACAATTGCAGGATGCTGTGGGCACGATGGACGGAATAATCGACACAGTTTCGGGGCCTCACTCGATCTCGCCATTGATCGGTTTGCTGAAGACTCATGGAAAGTTGATTCTGGTGGGCGCACCATCGACGCCACTCGAGTTCTCGGCCATGTCTTTACTTATAGGGGGGAAGACAATTACAGGGAGCGCGGGAGGAGGGATGAAGGTGGTGCAAGAGATGGTGGATTTTGCAGCGAAGCACAGGATCAGTGCCGAAGTAGAGGTGATACCGATGGAGTATGTGAACACAGCCTTAGAGCGACTCGCAAACAATGATGTCAAGTACCGTTTCGTCCTCGACGTGGCAAATACCATCAACTCTCCCACCATGGCTGCACTTTGA 1104 0.5163 MSNVMAAEEKGKVEAYGWAARDASGILSPFHFTRRANGENDITVKILYCGICHSDLHFLKDDFGMTLYPVVPGHEIVGEVTKVGRGVSKFRVGDIAGVPGLCGSCGSCSECNQGLEVYCPKMILTFSARDHDGSVTQGGYSDKIVVDEHFAVVIPRTLPLDGAAPLLCAGISVYSPMTSHGLARPGLHLGVVGLGGLGHVAVKFAKAFEMKVTVISTSPSKKKEALERLGADAFLISKDQQQLQDAVGTMDGIIDTVSGPHSISPLIGLLKTHGKLILVGAPSTPLEFSAMSLLIGGKTITGSAGGGMKVVQEMVDFAAKHRISAEVEVIPMEYVNTALERLANNDVKYRFVLDVANTINSPTMAAL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4260g00012 367 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 323 IPR036291 -
Pral4260g00012 367 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
Pral4260g00012 367 Pfam Alcohol dehydrogenase GroES-like domain 40 152 IPR013154 -
Pral4260g00012 367 SUPERFAMILY GroES-like 22 186 IPR011032 -
Pral4260g00012 367 FunFam Putative cinnamyl alcohol dehydrogenase 6 326 355 - -
Pral4260g00012 367 Gene3D - 18 355 - -
Pral4260g00012 367 PANTHER ALDEHYDE REDUCTASE 10 358 IPR047109 GO:0016616
Pral4260g00012 367 CDD CAD1 17 354 IPR047109 GO:0016616
Pral4260g00012 367 Pfam Zinc-binding dehydrogenase 196 319 IPR013149 -
Pral4260g00012 367 FunFam Cinnamyl alcohol dehydrogenase 169 325 - -
Pral4260g00012 367 Gene3D - 169 325 - -
Pral4260g00012 367 FunFam probable cinnamyl alcohol dehydrogenase 18 178 - -
Pral4260g00012 367 SMART PKS_ER_names_mod 25 353 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4260g00012 Pral-Chr4260 82876 84389 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4260g00012 14 359 Monolignol Biosynthesis Gene Families AT2G21730 57.759 1.27e-144 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4260g00012 K23232 - gmx:100801089 521.161