Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral425g00002 ATGGGAAAAAGAGTCCGTGATAAGAGACCTGATGTGGCAGAGGAGAATAATAGTAGTGGTGCTAGCACCAGTGCCAGTGCCAGTACTAGTCATCATGGAAGAACTTGGAGCATTCTTAACATTATGAAGTATCATCATTGGCCTCATAACGTCAAGAAAAGGCTCACACACAAGAAGAATGCTGCTGGAAAAAATCCTGATGGTGGAGCTGATAATTTGCAGGACTATGAACCGAACTCAAATTTATATGAAGAAATGTCCGTACAGTCCACTTCACCAGCCAAACATTCTGTGAAAGCCAGACTAAAAGCACTTCTTAGTGATGAGATAGCCAGAAAGAAGGGTCAGCATAAAAGAAGTTCAACCTACCCTGCAAAGCCAAGACCACCAATCAAAGCAGTTTCTATTCCCAGTTTAGATCACTCAGATGTTAATCTCGTCTCTGAATCGGTTCCAACAGAAAATAATCCTAAAATGGCTCCACATACTACTGAGACGTTGGAGAATTTGCCATTAGCATGCTCAACAGCCAATAAGGAGATCTGTGTAGAGTGTGGGACCATGTTTTCTAGTGGTTCAATGGAGCATAATAGTATGGTTCATAAACATCAGAAACCGCCATCAGAATATCACAAAGCATTGATGAAGGAAACACTGAGTTGTGAAGAGAAGTCCATGCATGCCAAGTTACTCACAACTGACGTGTCACCTTATCTATTTAAGGATTTCTTGGATGCTCTTGATATGATAAATTCAAATAAGAATTTGCTGTTAAAATTTCTGCAGCATCAACATTCTCCTTTGGCATGCCATTTTCCCAACCAACAGGAATCAGCAAGAAAGATAAGACTAAATAAGTCTATTTCATTTCCTGTACCTGGCTCGTCGTCATCATCATCCCAATTTAAAAGACAAAACACAAACAAAATGGCAGATGAAATGCTCAAATCAAGAGAGGTACAAAATGATGGTCAAACACAAAAGGTAATATCTCCGTCTGAATCTTCAGAAAAAAGTGACCAGCAGCAGCCTGTTTCGTTGGACTCTACTTATTATGCATCATTACCACCCCGGGTTCGAAATCCTAGGGCTATTAAGCGTTTCAAGGATCTTAGACAGAAGGTGAAACATGTTCTTGAAGAGAGCAAAAATGAGAAACGCCGCATAGCCATGGATGCTGTGTATGACAAAATTCCTCATGGAAATAAAGTTCCCATAGAATTGAAGAGGAAGATTCCCAAAGTTCCCATAGATACTATTTCACCAAGTGAATTTGGCAATTTTAAAAAACGTCAGATATCTCCAATGAGGACTGCATCTTTGAATGAATCAGTTTGGAAATATTCTCAGCTTTACGAGACTTGTTTTAACAAAGGAACTAGGTACCCTAAGTCTGAGAGGTTAAAGGCGAAAATGGAGGAGAAAAATCCAATATTAAGGACCCCAAAATCCTTTCAAAGGTTTCTTTCACTGCCTAATCTTAAAGATTACTTTTCTCAAAATGAGGAGCCTTCTTCTGTTTTACCTCCCCAGATTCCAATTAGGAAATTTGGAGAGAGAACCGCTAGCCCAAGCACTAGTGTAGATAACATTACAACTCCAGAAAGTGTTTTAAAAGGTGTCCAAAGAGGAATAGCCATCAGAAGTGATACAGGGTTGGCATCAGATGAGGACAAGGAGTCAAATCAAAATGAAAGTGTAGGAATTGATGATTATTTCGGAAAAGTAACAGACAGTGAGATGAATGAATCAACTTCTATTGTCGCTGAAACAAAATCAATCTCCTTCTCTGGCTCCAGCTTCCTAGATGATTCAGTTAGCTCTGATGAGAGGCTATCTTTACCAGAAGTTTCCTACTTCACCATCTGGTTACGGTTGAATGGAACAGAATCACAAATAAAGCCATGGCCAACTGATGGATTGGATCATCTGGCAGAGCAACTTCAAGAGCTTGACATTGCAGACTATCATGAATTAGTGAGTAGTGAAAATGATTTTCAGAAATTTAGCACTTTGAACAAGCATTTGGACTTGGGGATTCCTAGCCTTGGAGTGGACACAGATAGTGTGGCTGAATTTAACTATGTGAAAGATGTATTAGAGCTATCTGGGTTATCCACAAGTCATGAATACCTTAGCACATGGTTTTCCAACGAGCAACCAGTTGATCCTACAGTGTATGATGAATTAGAAGGTTGCTTACTATTTGATCCTCAAAGTGCTCGTAACGAAGAAACCAGGGCTCACTGCAACCATTTGATTTTGTTTGATTTAATCAATGAGGTATTGATTGAGATTTTTGGGAGATCATACAGTTATTACCCAAAGTCGTTATCTTCTCTCTGTCATGTTTATCCAATACGAGTAGGAGACCAAGTTCTAGGACAAGTGTGGACACTTATCAAGTGGTATCTGAACTTGAATTCAGAGTTTTATCCATCTTTGGATTACTATGTTAGCAGAGACTTGGCAAGAAGTGATGGGTGGATGAATCTCCAGTTTGATTCTGAATGCGTGGGGCTTGAGTTAGATGACCTTATTTTCGATGATCTTTTGGAGGAGATCATCTGCAATTGA 2577 0.395 MGKRVRDKRPDVAEENNSSGASTSASASTSHHGRTWSILNIMKYHHWPHNVKKRLTHKKNAAGKNPDGGADNLQDYEPNSNLYEEMSVQSTSPAKHSVKARLKALLSDEIARKKGQHKRSSTYPAKPRPPIKAVSIPSLDHSDVNLVSESVPTENNPKMAPHTTETLENLPLACSTANKEICVECGTMFSSGSMEHNSMVHKHQKPPSEYHKALMKETLSCEEKSMHAKLLTTDVSPYLFKDFLDALDMINSNKNLLLKFLQHQHSPLACHFPNQQESARKIRLNKSISFPVPGSSSSSSQFKRQNTNKMADEMLKSREVQNDGQTQKVISPSESSEKSDQQQPVSLDSTYYASLPPRVRNPRAIKRFKDLRQKVKHVLEESKNEKRRIAMDAVYDKIPHGNKVPIELKRKIPKVPIDTISPSEFGNFKKRQISPMRTASLNESVWKYSQLYETCFNKGTRYPKSERLKAKMEEKNPILRTPKSFQRFLSLPNLKDYFSQNEEPSSVLPPQIPIRKFGERTASPSTSVDNITTPESVLKGVQRGIAIRSDTGLASDEDKESNQNESVGIDDYFGKVTDSEMNESTSIVAETKSISFSGSSFLDDSVSSDERLSLPEVSYFTIWLRLNGTESQIKPWPTDGLDHLAEQLQELDIADYHELVSSENDFQKFSTLNKHLDLGIPSLGVDTDSVAEFNYVKDVLELSGLSTSHEYLSTWFSNEQPVDPTVYDELEGCLLFDPQSARNEETRAHCNHLILFDLINEVLIEIFGRSYSYYPKSLSSLCHVYPIRVGDQVLGQVWTLIKWYLNLNSEFYPSLDYYVSRDLARSDGWMNLQFDSECVGLELDDLIFDDLLEEIICN 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral425g00002 858 MobiDBLite consensus disorder prediction 112 136 - -
Pral425g00002 858 Pfam Domain of unknown function (DUF4378) 692 854 IPR025486 -
Pral425g00002 858 Pfam Protein of unknown function (DUF3741) 223 265 IPR022212 -
Pral425g00002 858 PANTHER PROTEIN TRM32 17 858 IPR044257 -
Pral425g00002 858 MobiDBLite consensus disorder prediction 1 32 - -
Pral425g00002 858 MobiDBLite consensus disorder prediction 288 307 - -
Pral425g00002 858 MobiDBLite consensus disorder prediction 320 350 - -
Pral425g00002 858 MobiDBLite consensus disorder prediction 317 355 - -
Pral425g00002 858 MobiDBLite consensus disorder prediction 15 32 - -
Pral425g00002 858 Coils Coil 365 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral425g00002 Pral-Chr425 39895 43774 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral425g00002 234 848 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 35.725 4.06e-85 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral425g00002 - - pcin:129319794 1214.13