Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4258g00033 ATGGCTCTTCCCGGTTCTCTGCAGCTGTCCCATGATTTCGGACATTGCAGGAACCCGGGCTGCTATAACCAATATATGGTACTAGGGCTACTGTACAGAACCAAGTTAGATTTATCAAGTGCAGCTCCGTTATATCATGTTTCGTTCCTGAAGCAGGATTGGCGGAGAACTCAACTCTTTTGCAATATAAATAGGCCAATACATACCTTATTTTGCAAGTCACATGCTTTTAAGTGCCATTCTTTTCTTAGACAAGGCCCGCAAAGTGAGCTACCTATTTCTACGGTGGCGGCCACAGCACCGGCAAGGTCTTATAATCTATTACAATGTAGTCCTGTCACAGTAAAGTTGATTCCAGCCATTGGCATCATCACTTTTGCAGTATGGGGTGTTGGCCCATTAATGTATCATATAAGAAAACTGCTTCTCCAGAGGAGCGACAATAGTTGGAAGAAAAGTAGCACACATTATGCAGTAACTTCTTACATCCAGCCATTACTGTTATGGACTGGAGTTATGCTTATTTGCAGAGCCTTTGACCCATTAAATTTACCTTCAGAAGCAGCTCAAGCTGTCAAGGAACGGCTTTTGGCTTTTGCACGATCATTGTCAACTGTACTTGCCTTTGCCTATTGTATATCACGTATGATTCAACAAGCACAGAAATTCTTCACGGAGGGTGCTGCTGATGCCTGTGAGACAAGGAATATGGGATTCCAGTTTGCAGGCAAAGCTGTTTATTCTGCAGTATGGATTGCTGCCTTCTCTTTGTTCATGGAGTTGGTGGGCTTTTCTACTCAGAGGTGGGTTACCGCAGGAGGTCTCGGGACTGTTTTGTTGACTCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCAAGCGTGATAATTCATACAACTCGGCCTTTCGTGGTGAATGAATGGATTCAAACAAAGGTTGAAGGCTATGAAGTCTCTGGTACTGTGGAGCATGTTGGCTGGTGGTCACCCACAATTATACGTGGTGAAAATCGTGAAGCTGTTTATATTCCAAACCACAAGTTCACAATGAGCGTCGTGCGAAACCTCAGTCAGAAAACACATTGGCGTTTCAAGACCCACCTGGCTATTAACCATATGGATGTTAATAAGATAAATAACATTGTTGCTGACATGAGAAAAGTCTTGGCCAAAAACCCTCAAGTCGAGCAGCAGAAGCTGCACAGGAGAGTGTTTCTGGACAATATAGATCATGAAAATCAGGCTCTTTTGATAATGGTGTCCTGTTTTGTCAAGACCTCGCATCACGAAGAATTTTTGTGCGTTAAGGAAGCTTTGCTACTGGATCTTCTTAGGGTTGTTGGCCATCATCGAGCCCGACTTGCAACCCCAGTTCGAACACTGCAGAAAATTTACAGTGATGCTGACTTGGAGAATATACCATATGTGGATTCTGTATTTAGTGGTACTGGAACAGTATCAAACAGTACAATAATAATAGAACCACCGTACAAGATCAAAGCAGATGATACGACAAAGAGTCGATCAGCCACGCAAACCAAGGTTGGGCCAGCGGGGCCAGATCATAAGGTCAGAGAAACTCATTCTGAGTCGAAGGCAGATGTTGAAGCTGTGATGACTAACTCTGATGCGAATGGAAACTTGAAGGTCGCCGTTTCATCCAAACCCAACCCTGAAGTGGGTGAACATGAGCCAATGAAATCGGAGTCAAAGGAAAACCTGGAGGCTCAGCACGTGTCTGTTTCTAACTCCAAAGTTAGTGAAGCTGCTGTAAATAACATGACCGAGAAGAATTCTGATGTCATACAATCTAAGAATGCTGTCAAAGGAGGTGGACGTCCTAAGAATACGCCAACAAAACAGAGAGATGAAAGGAAACCGGCGGCACAGCCTCAAATGCCTAGGCCTGTCCTTGAAGAGAATATAGTACTTGGCGTAGCATTGGAGGGATCAAAAAGAACTCTTCCCATCGAGGAGGGGATCGATTCATCTACTGCTCGAGAGGCAAGAGAAATGGCTGCCCAGGGGAGAAATAGATCCTTGACAGCTGAGAACGGGGAAGATAAGTAA 2070 0.4425 MALPGSLQLSHDFGHCRNPGCYNQYMVLGLLYRTKLDLSSAAPLYHVSFLKQDWRRTQLFCNINRPIHTLFCKSHAFKCHSFLRQGPQSELPISTVAATAPARSYNLLQCSPVTVKLIPAIGIITFAVWGVGPLMYHIRKLLLQRSDNSWKKSSTHYAVTSYIQPLLLWTGVMLICRAFDPLNLPSEAAQAVKERLLAFARSLSTVLAFAYCISRMIQQAQKFFTEGAADACETRNMGFQFAGKAVYSAVWIAAFSLFMELVGFSTQRWVTAGGLGTVLLTLAGREIFTNFLSSVIIHTTRPFVVNEWIQTKVEGYEVSGTVEHVGWWSPTIIRGENREAVYIPNHKFTMSVVRNLSQKTHWRFKTHLAINHMDVNKINNIVADMRKVLAKNPQVEQQKLHRRVFLDNIDHENQALLIMVSCFVKTSHHEEFLCVKEALLLDLLRVVGHHRARLATPVRTLQKIYSDADLENIPYVDSVFSGTGTVSNSTIIIEPPYKIKADDTTKSRSATQTKVGPAGPDHKVRETHSESKADVEAVMTNSDANGNLKVAVSSKPNPEVGEHEPMKSESKENLEAQHVSVSNSKVSEAAVNNMTEKNSDVIQSKNAVKGGGRPKNTPTKQRDERKPAAQPQMPRPVLEENIVLGVALEGSKRTLPIEEGIDSSTAREAREMAAQGRNRSLTAENGEDK 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4258g00033 689 Pfam Mechanosensitive ion channel 244 450 IPR006685 GO:0016020|GO:0055085
Pral4258g00033 689 MobiDBLite consensus disorder prediction 560 574 - -
Pral4258g00033 689 SUPERFAMILY Sm-like ribonucleoproteins 287 357 IPR010920 -
Pral4258g00033 689 MobiDBLite consensus disorder prediction 519 533 - -
Pral4258g00033 689 Gene3D - 303 358 IPR023408 -
Pral4258g00033 689 MobiDBLite consensus disorder prediction 650 689 - -
Pral4258g00033 689 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 676 IPR045042 -
Pral4258g00033 689 MobiDBLite consensus disorder prediction 575 605 - -
Pral4258g00033 689 Gene3D - 195 301 - -
Pral4258g00033 689 MobiDBLite consensus disorder prediction 502 638 - -
Pral4258g00033 689 MobiDBLite consensus disorder prediction 534 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4258g00033 Pral-Chr4258 264495 270775 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4258g00033 9 684 Mechanosensitive Ion Channel Family AT5G10490 52.647 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4258g00033 K22047 - gmx:100789444 898.656