Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4258g00032 ATGGCTCTTCCCGGTTCTCTGCAGCTGTCCCATGATTTCGGACATTGCAGGAACCCGGGCTGCTATAACCAATATATGGGGCTACTGTACAGAACCAAGTTAGATTTATCAAGTGCAGCTCCGTTATATCATGTTTCGTTCCTGAAGCAGGATTGGCGGAGAACTCAACTCTTTTGCAATATAAATAGGCCAATACATACCTTATTTTGCAAGTCACATGCTTTTAAGTGCCATTCTTTTCTTAGACAAGGCCCGCAAAGTGAGCTACCTATTTCTACGGTGGCGGCCACAGCACCGGCAAGGTCTTATAATCTATTACAATGTAGTCCTGTCACAGTAAAGTTGATTCCAGCCATTGGCATCATCACTTTTGCAGTATGGGGTGTTGGCCCATTAATGTATCATATAAGAAAACTGCTTCTCCAGAGGAGCGACAATAGTTGGAAGAAAAGTAGCACACATTATGCAGTAACTTCTTACATCCAGCCATTACTGTTATGGACTGGAGTTATGCTTATTTGCAGAGCCTTTGACCCATTAAATTTACCTTCAGAAGCAGCTCAAGCTGTCAAGGAACGGCTTTTGGCTTTTGCACGATCATTGTCAACTGTACTTGCCTTTGCCTATTGTATATCACGTATGATTCAACAAGCACAGAAATTCTTCACGGAGGGTGCTGCTGATGCCTGTGAGACAAGGAATATGGGATTCCAGTTTGCAGGCAAAGCTGTTTATTCTGCAGTATGGATTGCTGCCTTCTCTTTGTTCATGGAGTTGGTGGGCTTTTCTACTCAGAGGTGGGTTACCGCAGGAGGTCTCGGGACTGTTTTGTTGACTCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCAAGCGTGATAATTCATACAACTCGGCCTTTCGTGGTGAATGAATGGATTCAAACAAAGGTTGAAGGCTATGAAGTCTCTGGTACTGTGGAGCATGTTGGCTGGTGGTCACCCACAATTATACGTGGTGAAAATCGTGAAGCTGTTTATATTCCAAACCACAAGTTCACAATGAGCGTCGTGCGAAACCTCAGTCAGAAAACACATTGGCGTTTCAAGACCCACCTGGCTATTAACCATATGGATGTTAATAAGATAAATAACATTGTTGCTGACATGAGAAAAGTCTTGGCCAAAAACCCTCAAGTCGAGCAGCAGAAGCTGCACAGGAGAGTGTTTCTGGACAATATAGATCATGAAAATCAGGCTCTTTTGATAATGGTGTCCTGTTTTGTCAAGACCTCGCATCACGAAGAATTTTTGTGCGTTAAGGAAGCTTTGCTACTGGATCTTCTTAGGGTTGTTGGCCATCATCGAGCCCGACTTGCAACCCCAGTTCGAACACTGCAGAAAATTTACAGTGATGCTGACTTGGAGAATATACCATATGTGGATTCTGTATTTAGTGGTACTGGAACAGTATCAAACAGTACAATAATAATAGAACCACCGTACAAGATCAAAGCAGATGATACGACAAAGAGTCGATCAGCCACGCAAACCAAGGTTGGGCCAGCGGGGCCAGATCATAAGGTCAGAGAAACTCATTCTGAGTCGAAGGCAGATGTTGAAGCTGTGATGACTAACTCTGATGCGAATGGAAACTTGAAGGTCGCCGTTTCATCCAAACCCAACCCTGAAGTGGGTGAACATGAGCCAATGAAATCGGAGTCAAAGGAAAACCTGGAGGCTCAGCACGTGTCTGTTTCTAACTCCAAAGTTAGTGAAGCTGCTGTAAATAACATGACCGAGAAGAATTCTGATGTCATACAATCTAAGAATGCTGTCAAAGGAGGTGGACGTCCTAAGAATACGCCAACAAAACAGAGAGATGAAAGGAAACCGGCGGCACAGCCTCAAATGCCTAGGCCTGTCCTTGAAGAGAATATAGTACTTGGCGTAGCATTGGAGGGATCAAAAAGAACTCTTCCCATCGAGGAGGGGATCGATTCATCTACTGCTCGAGAGGCAAGAGAAATGGCTGCCCAGGGGAGAAATAGATCCTTGACAGCTGAGAACGGGGAAGATAAGTAA 2064 0.4428 MALPGSLQLSHDFGHCRNPGCYNQYMGLLYRTKLDLSSAAPLYHVSFLKQDWRRTQLFCNINRPIHTLFCKSHAFKCHSFLRQGPQSELPISTVAATAPARSYNLLQCSPVTVKLIPAIGIITFAVWGVGPLMYHIRKLLLQRSDNSWKKSSTHYAVTSYIQPLLLWTGVMLICRAFDPLNLPSEAAQAVKERLLAFARSLSTVLAFAYCISRMIQQAQKFFTEGAADACETRNMGFQFAGKAVYSAVWIAAFSLFMELVGFSTQRWVTAGGLGTVLLTLAGREIFTNFLSSVIIHTTRPFVVNEWIQTKVEGYEVSGTVEHVGWWSPTIIRGENREAVYIPNHKFTMSVVRNLSQKTHWRFKTHLAINHMDVNKINNIVADMRKVLAKNPQVEQQKLHRRVFLDNIDHENQALLIMVSCFVKTSHHEEFLCVKEALLLDLLRVVGHHRARLATPVRTLQKIYSDADLENIPYVDSVFSGTGTVSNSTIIIEPPYKIKADDTTKSRSATQTKVGPAGPDHKVRETHSESKADVEAVMTNSDANGNLKVAVSSKPNPEVGEHEPMKSESKENLEAQHVSVSNSKVSEAAVNNMTEKNSDVIQSKNAVKGGGRPKNTPTKQRDERKPAAQPQMPRPVLEENIVLGVALEGSKRTLPIEEGIDSSTAREAREMAAQGRNRSLTAENGEDK 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4258g00032 687 MobiDBLite consensus disorder prediction 558 572 - -
Pral4258g00032 687 SUPERFAMILY Sm-like ribonucleoproteins 285 355 IPR010920 -
Pral4258g00032 687 Pfam Mechanosensitive ion channel 242 448 IPR006685 GO:0016020|GO:0055085
Pral4258g00032 687 MobiDBLite consensus disorder prediction 517 531 - -
Pral4258g00032 687 Gene3D - 301 356 IPR023408 -
Pral4258g00032 687 Gene3D - 193 299 - -
Pral4258g00032 687 MobiDBLite consensus disorder prediction 648 687 - -
Pral4258g00032 687 MobiDBLite consensus disorder prediction 573 603 - -
Pral4258g00032 687 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 674 IPR045042 -
Pral4258g00032 687 MobiDBLite consensus disorder prediction 500 636 - -
Pral4258g00032 687 MobiDBLite consensus disorder prediction 532 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4258g00032 Pral-Chr4258 264495 270775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4258g00032 9 682 Mechanosensitive Ion Channel Family AT5G10490 52.802 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4258g00032 K22047 - gmx:100789444 900.582