Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4258g00028 ATGGCGGAACAGAAGAACAAATGGAACTGGGAGGTGAGTGGGTTCGACCCATGGAAGTCTCCGACTTCGTCTTCCTCTTCTTCATTTGAGCAACACGATCAGAAGCCCCCTGCACCATTGGTAAGGAGGTATTCCATCTCCACCTCCTCGGTTCTTCCGCACTCAGAGATGTCCAAACACTCCATGGCCTCCAAGCTTCACCGATTGGGGGACAAAGTTAAGCTCGCTAGAGAAGACTACCAGCAGTTAAGGCAAGAGGCGAGTGAACTTCAAGAATACTCAAATGCAAAACTTGACCGCGTTACCCGATACCTTGGTGTTCTTGCAGACAAGACCCGCAAGTTGGATCAAGCTGCCCTTGAAACTGAAACCAGAATTTTGCCAATTATCAACGAGAAGAGGAGATTGTTCAATGACTTGTTGACATCTAAAGGAAACATCCGAGTATACTGCCGTGCAAGACCATTATTTGAAGATGAAGGTCCCTCAGTTGTTGAATTCCCAGATGAATATACTATTCGTGTAAACACTGGTGATGAATCATTGTCCAACTCCAAGAAAGATTTTGAATTTGATCGTGTCTATGGACCTCACGTTGGACAAGCCGAATTGTTTAACGATGTTCAGCCACTGGTGCAGTCAGCTTTGGATGGATACAATGTCTCCATATTTGCATATGGGCAGACACATTCTGGAAAGACACACACTATGGAAGGACCAAGCTATGATCGAGGTTTATATGCTCGTTGTTTTGAAGAATTGTTTGATTTGGCCAATTCAGATTCAACTTCTACTTCTCAATACAAGTTCTCTGTTACAATTTTTGACCTTTATAATGAACAGACAAGGGATCTACTTTTGGAGTCGGGGAAAAGCATGCCCAAACTCTCTTTAGGATCACCACAATATTTTGTGGAACTGGTGCAGGAAAAAGTTGAAAACCCTATTGACTTTTCTAGGGTTTTGAAAAATGCATTTCAGAAGCGAGGAAATGATTTATCGAAGATTAATGTCTCTCATTTGATTGTCACAATACATATATTTTATGACCATTTGATCACTGGGGAAAGCTCATATAGCAAACTTTCTCTGGTTGACTTGGCTGGAAGTGAAGGTCTGATAACAGAAGATGATAGCGGGGAGCGTGTGACAGATTTGCTGCATGTTATGAAGTCACTGTCAGCGTTGGGGGATGTTTTGTGCTCTTTGACCTCAAAGAAGGATATTGTTCCTTATGAGAATTCAGTGCTTACAAATCTGCTTGCAGATTCAATTGGTGCGAGTTCCAAAACTCTGATGATGGTAAATGTCTGTCCAAATGTTAAAAATTTGTCCGAGACATTATCATCTCTCAATTTCTCGGCTAGAGCTCGAAATTCTGTATTAAGCCTAGGAAATCGAGATACAATTAAGAAGTGGAGAGATGTTGCAAATGATGCGCGGAAGGAGTTGCATGAGAAGGAAAATAAAGTCCAAGGTCTGAAACAAGAGGTTTTAGGACTGAAGCAAGCATTGAAAGAAGCTAATGATCAGTGTGTCCTACTCTTCAATGAAGTACAGAAGGCGTGGAAAGTTTCTTCTGCCTTGCAGACAGATTTAAAGGCAGAGCATATTATGTTAGTGGATAAGCATAAGATAGAAAAGGAACAAAATGCTCAGCTTAGAAATCAAGTGGCTCAATTGCATCAGTTAGAACAAGAGCAGAAATTGCATATACAAGAGCAAGATTCAACCATCCAAAGTTTACAGTTTCAACATGATCGTTTGTTTCCTTTGCTGGCTTATCAAAGTACTTACTATTACAGGCTCAAATCAAGGACTCTTGAAACGCAACTCAATGAAGCCGTGAAGTCGAACGGACCTTGTTCAACATTTGACTCCAAGCCAAATTCTGGAGCTCTATCCAATGCCAGAGGAGATGGCATGGATTCTTCTGCAGTTACCAAGAAACTAGAAGAGGAACTCAAGAAACGAGATGCTCTGATTGAGAGGTTGCATGAAGAAAATGAGAAGTTGTTTGATAGGTTGACTGAGAAAGCATCGCTGGCTGTGACTCCTCAGCTTTCAAGCCCATCATCTACAGGGACAACTAATGCTCAACCTCAAGATGCAGGGAGGAATGACACCAATAATACAAGAGCTCGTTCTATGGATGCCCTTCCTTCACCTGTGGCCTCGGATAAAAATGATGGAACTGTTGCCTTAGTTAAAGCTGGCTCTGAAAAAGTTAAGACTACCCCTGCAGGTGAATATCTTACTGCTGCACTGAATGACTTTGATCCAGATCAAGATGAAGGCCTTGCTGCCATTTCTGATGGTGCAAACAAGCTTTTGATGCTGGTTCTAGCTGCTGTAATTAAAGCCGGTGCCTCCAGAGAGCATGAGATACTTGCTGAGATTAGGGATGCTGTTTTCTCTTTTATTCGAAAAATGGAACCAAAGCGAGTAATGGACACGATGCTTGTTTCTCGTGTTAGAATTCTGTATATAAGGTCTTTACTTGCTAGATCGCCAGAACTGCAATCCATCAAGGTCTTGCCTGTTGAGTGCTTTCTTGAAAAAGCTAACACTGGGCGCAGTAGAAGTTCAAGCCGGGGGAATAGTCCTGGAAGATCCCCTGTGCAATATGTTGATGAGCAGATCCAAGGATTTAAAGTTAATCTGAAGCCAGAGAAGAAATCCAAATTTTCATCTGTTGTATTAAAGATACGTGGAATTGATCAGGACACCTGGAGACAGCAGGTAACTGGTGGGAAGCTTAGGGAAATTACTGAAGAAGCCAAAAGCTTCGCAATTGGGAACAAGGGTCTTGCTGCGCTCTTTGTGCATACTCCAGCTGGTGAGCTGCAGCGGCAAATTAGATCCTGGCTTGCAGAGAACTTTGATTTTTTATCTGTTACTGGAAATGATGCACCCGGGGGGTCAGCTGGTCAGTTGGAGCTTCTTTCAACTGCAATTATGGATGGTTGGATGGCAGGACTCGGGGCTGCCATGCCTCCCAATACTGATGCTCTTGGCCAGCTTTTATTTGAATATTCAAAACGCGTCTATACTTCTCAACTGCAGCACCTGAAGGATATTGCTGGTACCTTGGCAACTGAAGAGGCTGAAGATGTTGCACAAGTAGCCAAGCTGCGTTCAGCTCTTGAATCTGTTGATCACAAGAGAAGAAAGATTTTGCAGCAAATGAGAAGTGATGTGGCTTTGCTGAAATTGGACGATGGTGGCTCACCAATTCAAAGTCCTTCTACTGCAGCTGAAGATGCCCGATTAGCATCCCTCATTGCACTTGATGGCATATTAAAGCAAATCAAGGATATAACTGCACAGGCTAATGTGAATGCCTTGAGCGGCAGTAAGAAAAGAACAATGCTTGCTTCTCTGGATGAACTAACACAAAGGATGCCTTCGCTTCTTGAAATTGATCATCCATGTGCTCAGAAGCAAATTGCAGATGCTTGCCGCATGATTGAGTCTATTCCCGAAGATGACCGTATTCAGGATCTACCACATGCTCGGAAGGCATCAACTGATGTGGGGTCTGGAATTGAAACTGACGTGGCACAATGGAATGTTCTTCAATTTAACACAGGCTCTTCCACACCATTCATAATCAAATGTGGAGCAAACTCGGACTCAAAATTAGTCATCAAAGCCAATGCTCGAGTTCAGGAACCTACAGGTGGTGAGATTGTGAGGGTCGCCCCGAAACCATCCATTTTGGAAAATATGAGCTTGGAGGAGATGAAACATGTGTTTTCTGATCTCCCAGAGGCTCTGAGCTTGCTTGCCCTAGCCAGAACAGCTGATGGAACTCGAGCAAGGTATTCTAGATTATACAGGACCTTGGCTTTGAAGGTCCCATCGTTGAGGGATATGGTTAGTGAGCTTGAAAAAGGTGGTGTACTGAAAGATGTGAGGACATAA 3927 0.4316 MAEQKNKWNWEVSGFDPWKSPTSSSSSSFEQHDQKPPAPLVRRYSISTSSVLPHSEMSKHSMASKLHRLGDKVKLAREDYQQLRQEASELQEYSNAKLDRVTRYLGVLADKTRKLDQAALETETRILPIINEKRRLFNDLLTSKGNIRVYCRARPLFEDEGPSVVEFPDEYTIRVNTGDESLSNSKKDFEFDRVYGPHVGQAELFNDVQPLVQSALDGYNVSIFAYGQTHSGKTHTMEGPSYDRGLYARCFEELFDLANSDSTSTSQYKFSVTIFDLYNEQTRDLLLESGKSMPKLSLGSPQYFVELVQEKVENPIDFSRVLKNAFQKRGNDLSKINVSHLIVTIHIFYDHLITGESSYSKLSLVDLAGSEGLITEDDSGERVTDLLHVMKSLSALGDVLCSLTSKKDIVPYENSVLTNLLADSIGASSKTLMMVNVCPNVKNLSETLSSLNFSARARNSVLSLGNRDTIKKWRDVANDARKELHEKENKVQGLKQEVLGLKQALKEANDQCVLLFNEVQKAWKVSSALQTDLKAEHIMLVDKHKIEKEQNAQLRNQVAQLHQLEQEQKLHIQEQDSTIQSLQFQHDRLFPLLAYQSTYYYRLKSRTLETQLNEAVKSNGPCSTFDSKPNSGALSNARGDGMDSSAVTKKLEEELKKRDALIERLHEENEKLFDRLTEKASLAVTPQLSSPSSTGTTNAQPQDAGRNDTNNTRARSMDALPSPVASDKNDGTVALVKAGSEKVKTTPAGEYLTAALNDFDPDQDEGLAAISDGANKLLMLVLAAVIKAGASREHEILAEIRDAVFSFIRKMEPKRVMDTMLVSRVRILYIRSLLARSPELQSIKVLPVECFLEKANTGRSRSSSRGNSPGRSPVQYVDEQIQGFKVNLKPEKKSKFSSVVLKIRGIDQDTWRQQVTGGKLREITEEAKSFAIGNKGLAALFVHTPAGELQRQIRSWLAENFDFLSVTGNDAPGGSAGQLELLSTAIMDGWMAGLGAAMPPNTDALGQLLFEYSKRVYTSQLQHLKDIAGTLATEEAEDVAQVAKLRSALESVDHKRRKILQQMRSDVALLKLDDGGSPIQSPSTAAEDARLASLIALDGILKQIKDITAQANVNALSGSKKRTMLASLDELTQRMPSLLEIDHPCAQKQIADACRMIESIPEDDRIQDLPHARKASTDVGSGIETDVAQWNVLQFNTGSSTPFIIKCGANSDSKLVIKANARVQEPTGGEIVRVAPKPSILENMSLEEMKHVFSDLPEALSLLALARTADGTRARYSRLYRTLALKVPSLRDMVSELEKGGVLKDVRT 1308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4258g00028 1308 Coils Coil 544 574 - -
Pral4258g00028 1308 Gene3D Kinesin motor domain 88 460 IPR036961 -
Pral4258g00028 1308 SMART kinesin_4 144 468 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4258g00028 1308 ProSitePatterns Kinesin motor domain signature. 360 371 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pral4258g00028 1308 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 459 IPR027417 -
Pral4258g00028 1308 MobiDBLite consensus disorder prediction 1 41 - -
Pral4258g00028 1308 MobiDBLite consensus disorder prediction 683 717 - -
Pral4258g00028 1308 MobiDBLite consensus disorder prediction 618 646 - -
Pral4258g00028 1308 Pfam Kinesin motor domain 152 459 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4258g00028 1308 PRINTS Kinesin heavy chain signature 410 431 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4258g00028 1308 PRINTS Kinesin heavy chain signature 218 239 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4258g00028 1308 PRINTS Kinesin heavy chain signature 361 379 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4258g00028 1308 MobiDBLite consensus disorder prediction 16 33 - -
Pral4258g00028 1308 FunFam kinesin-like protein KIN-14B isoform X1 93 461 - -
Pral4258g00028 1308 Coils Coil 66 93 - -
Pral4258g00028 1308 Coils Coil 648 671 - -
Pral4258g00028 1308 ProSiteProfiles Kinesin motor domain profile. 146 460 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4258g00028 1308 MobiDBLite consensus disorder prediction 618 642 - -
Pral4258g00028 1308 PANTHER KINESIN-LIKE PROTEIN KLP-3 59 674 IPR027640 GO:0003777|GO:0007018
Pral4258g00028 1308 Coils Coil 470 511 - -
Pral4258g00028 1308 MobiDBLite consensus disorder prediction 683 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4258g00028 Pral-Chr4258 215326 231921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4258g00028 133 461 Calmodulin-binding Proteins AT5G65930 37.243 2.34e-51 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4258g00028 - - qsa:O6P43_033234 2047.71