Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4258g00015 ATGGCAGATAGCTTTGACAGGACGACCTCGACCCTTCTTTGTTCGGAGGACAGTGATACCGGCGTTGCTGATTTCGAATGTAATGCTGCAGATGATTCTGAAATTTCCCGTTCTTTGAACCACCAAAACGCTGGTTCGAACTGGGGCGGGTTCGAATCCGTATTGGGTTTTCCCTTGCAGAGTGAAGAAACTTTGAGATTATTGGCTGAGAGGGAGAGAGTATATATGCCCAAGGATGATTACCTCGTGAGATTGCGTAGTGGGGACTTGGACTTGAGTGTTAGGAGAGAGGCTCTTGATTGGATTTGGAAGGTTCACAACTATTATGGTTTTGGACCATTGAGCTTGTGTTTATCCATCAACTACTTTGATCGGTTCCTATCGATGTATGATTTGCCTAGAAGCCACAAATGGACTGGGCAATTGTTAGCCGTGGCTTGTTTGTCAATAGCAACCAAAGTGGAGGAAACCAAAATGCCTCAATTGATAGAATTTCAGGTTGAAGGAGCGAACTTTTTATTTGAAGCTAGAACCATTCAAAGAATGGAGCTATTGTTACTGAACACATTGCAATGGAAAATGCATGCTTTCACTCCTTGTTCCTTCATAGACAACTTCCTCGCTAAAATCCCTTACCACCAACATACAGACACATTCAAATCATCCATTTCTAGATCAATACAGCTCATACTGAGTATAACCAGAGGTGTTGATTTCTTGGAATTCAGGCCTTCTGAGATAGCCGCTGCCGTAGCCATTTCTGTTTCAAGAGAACTGCAATCGACTGAGCTTGATAAGGCTATAACTTGTTTTCTGATTGTGCAAAAGGAGAGAGTCCTGAAGTGTGTTGAACTGATCAGAGATTTGTTTTTGGTTAGTGTTTCCTCTGCTAATTTAGGGAGAAACTCGGGGGCATTTTTACCTCAAAGTCCTATGGGGGTGTTGGATGCTGCAAGCTTGAGCTATAAAAGTGAGGAACTAACAGATGGATCATGGCCAAATTCTTCACACGATAGTCCAAATGCCAAGAGGAACAAATCAGGCAAATCTGAAGACACTTCCAAGTCATGA 1071 0.4276 MADSFDRTTSTLLCSEDSDTGVADFECNAADDSEISRSLNHQNAGSNWGGFESVLGFPLQSEETLRLLAERERVYMPKDDYLVRLRSGDLDLSVRREALDWIWKVHNYYGFGPLSLCLSINYFDRFLSMYDLPRSHKWTGQLLAVACLSIATKVEETKMPQLIEFQVEGANFLFEARTIQRMELLLLNTLQWKMHAFTPCSFIDNFLAKIPYHQHTDTFKSSISRSIQLILSITRGVDFLEFRPSEIAAAVAISVSRELQSTELDKAITCFLIVQKERVLKCVELIRDLFLVSVSSANLGRNSGAFLPQSPMGVLDAASLSYKSEELTDGSWPNSSHDSPNAKRNKSGKSEDTSKS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4258g00015 356 Gene3D - 78 195 - -
Pral4258g00015 356 SMART Cyclin_C_2 197 323 IPR004367 -
Pral4258g00015 356 FunFam D2/4-type cyclin 78 195 - -
Pral4258g00015 356 MobiDBLite consensus disorder prediction 326 356 - -
Pral4258g00015 356 CDD CYCLIN_AtCycD-like_rpt1 94 192 - -
Pral4258g00015 356 Pfam Cyclin, C-terminal domain 198 294 IPR004367 -
Pral4258g00015 356 ProSitePatterns Cyclins signature. 95 126 IPR006671 -
Pral4258g00015 356 MobiDBLite consensus disorder prediction 326 341 - -
Pral4258g00015 356 Gene3D - 67 285 - -
Pral4258g00015 356 Pfam Cyclin, N-terminal domain 66 194 IPR006671 -
Pral4258g00015 356 SUPERFAMILY Cyclin-like 55 195 IPR036915 -
Pral4258g00015 356 SMART cyclin_7 100 188 IPR013763 -
Pral4258g00015 356 MobiDBLite consensus disorder prediction 342 356 - -
Pral4258g00015 356 PANTHER CYCLINS 64 287 IPR039361 -
Pral4258g00015 356 CDD CYCLIN_AtCycD-like_rpt2 198 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4258g00015 Pral-Chr4258 154169 156718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4258g00015 60 267 Core Cell Cycle Gene Families AT5G65420 55.502 4.46e-80 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4258g00015 K18810 - qsa:O6P43_025224 402.905