Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4258g00008 ATGGAAGAAGCACTCAGGAGGCTTAACGGGTTGGCCCCGATTCCCGAACCCGACCCACATGACTCTATCTCCGAGCCCTCGAAGAAGTGCCCAACCACCACCACCGCCAAGAGGACGGTCAGAGAAAACGGCGGCACAATGAGGTACCGCGGCGTTCGGCGCAGGCCCTGGGGCCGTTACGCGGCGGAGATAAGAGACCCTCAGTCCAAGGAGCGACGGTGGCTCGGCACTTTCGACACAGCGGAGGAAGCTGCATGCGCCTATGACTGCGCCGCCCGAGCCATGCGTGGCCTCAAAGCGCGCACCAATTTCGTTTACCCGACTTCACCGCCTCCCTCTGCAACCACCGAACATCTTTTCCCTCATTTTGCCTTCCCCAAACAATCGCACAATCAAATGACCAAAAACCTGAACCCTCATAACCGCCCTTTAGGGTGGCCTACTTCTAGCTCTAACTCTCACGTCACTGATTTTTCTTCTCCTGCTAATTCTTCTCTGAACATGTTTCTGTTTCGTGACTACCTTAACTCTGCTTCTAATCCATCTTTGGTTACTTCTGCTCAGCAACTTTACAACCCCGTGAACAAGATCACATGTTCATGTTCTGGTTCCTCGTCTTCCACATCTTTACCTTCTAGTTCTGTTCCAGGCTGCTGTGTCGTGAATTCTGCTGGCGGGGATATGGAGGATGCCAAAATTACTGAAGCTGATGAAGAATCTGAATTCTTTCCCAGAGAGCATTCAGACTCTGGATTGTTGGAAGAGATAGTGCATAAGTTCTTACCAAAATCAAAGCCCAACCAGCAGTCGGAGGTTCGCGTTAAAGAGGAGACTCTGTCTCTGTCGACGGCACAGTTGCTTCCTCCTCAGCCAGTGTATGATCATGGCATGTTCACTTCCGCTACTTCTCTGTGCTATGAAAGTCTTGGCAATAAGGAGGTGACCAGGGCTGAGAATTATGATGTTACTTCCGACCACCGAGGTTTCCCCATGCAGCAGTTTGACAGTTTTCAGAATGGTTACAGCACTGGACAAGGCTTGCCTCGTAGAAGCGACCTTCACTTGATGAACGGTGCAGGGTACTCCATCATGGAAGATATTTTCCAGTATCCAGAGCTTCTCAATGAATTTGTAGCTAGGATACAAAACGCTTAA 1155 0.5048 MEEALRRLNGLAPIPEPDPHDSISEPSKKCPTTTTAKRTVRENGGTMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYPTSPPPSATTEHLFPHFAFPKQSHNQMTKNLNPHNRPLGWPTSSSNSHVTDFSSPANSSLNMFLFRDYLNSASNPSLVTSAQQLYNPVNKITCSCSGSSSSTSLPSSSVPGCCVVNSAGGDMEDAKITEADEESEFFPREHSDSGLLEEIVHKFLPKSKPNQQSEVRVKEETLSLSTAQLLPPQPVYDHGMFTSATSLCYESLGNKEVTRAENYDVTSDHRGFPMQQFDSFQNGYSTGQGLPRRSDLHLMNGAGYSIMEDIFQYPELLNEFVARIQNA 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4258g00008 384 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 34 213 - -
Pral4258g00008 384 SMART rav1_2 48 111 IPR001471 GO:0003700|GO:0006355
Pral4258g00008 384 FunFam Ethylene-responsive transcription factor 2 47 106 - -
Pral4258g00008 384 ProSiteProfiles AP2/ERF domain profile. 48 105 IPR001471 GO:0003700|GO:0006355
Pral4258g00008 384 Pfam AP2 domain 48 97 IPR001471 GO:0003700|GO:0006355
Pral4258g00008 384 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Pral4258g00008 384 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
Pral4258g00008 384 Gene3D AP2/ERF domain 47 106 IPR036955 GO:0003700|GO:0006355
Pral4258g00008 384 MobiDBLite consensus disorder prediction 1 35 - -
Pral4258g00008 384 SUPERFAMILY DNA-binding domain 48 105 IPR016177 GO:0003677
Pral4258g00008 384 CDD AP2 48 104 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4258g00008 Pral-Chr4258 75427 76581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4258g00008 1 270 AP2-EREBP Transcription Factor Family AT1G24590 41.869 5.82e-45 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral4258g00008 AP2 2.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4258g00008 - - aprc:113860142 305.834