Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4258g00002 CGACCCCGCTTCAAGAAGAATCGTAAGAAGCGTGGCCACGTGAGCGCCGGTCACGGTCGTATCGGCAAGCACAGGAAGCACCCAGGTGGTCGTGGTAATGCTGGTGGTATGCACCACCATAGAATTCTCTTCGACAAGTATCACCCTGGTTATTTCGGGAAAGTAGGTATGCGCTACTTCCATAAGCTTCGCAATAAGTTCTACTGCCCTATTGTGAACATCGACAAGCTCTGGTCATTGGTTCCTAATGAGGTCAGAGAGAAGGCCTCCAAGGACAATGTTCCCTTGATTGATGTTACTCAGTATGGGTACTTCAAGGTTTTGGGTAAAGGAGTTCTGCCGGAGAACCGACCTGTTGTGGTGAAGGCCAAGCTTGTTTCCAAGAATGCGGAAAAAAAGATCAAGGAGGCCGGTGGGGCTGTGGTTCTTACTGCTTAG 438 0.5 RPRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPIVNIDKLWSLVPNEVREKASKDNVPLIDVTQYGYFKVLGKGVLPENRPVVVKAKLVSKNAEKKIKEAGGAVVLTA 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4258g00002 145 FunFam 60S ribosomal protein L27a 57 145 - -
Pral4258g00002 145 Gene3D - 57 145 - -
Pral4258g00002 145 SUPERFAMILY Ribosomal proteins L15p and L18e 5 144 IPR036227 -
Pral4258g00002 145 PANTHER 60S RIBOSOMAL PROTEIN L27A 3 145 - -
Pral4258g00002 145 MobiDBLite consensus disorder prediction 1 34 - -
Pral4258g00002 145 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 142 IPR021131 -
Pral4258g00002 145 Hamap 50S ribosomal protein L15 [rplO]. 1 144 IPR030878 GO:0003735|GO:0006412|GO:0015934
Pral4258g00002 145 ProSitePatterns Ribosomal protein L15 signature. 106 138 IPR001196 GO:0003735|GO:0005840|GO:0006412
Pral4258g00002 145 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4258g00002 Pral-Chr4258 16004 16665 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4258g00002 3 145 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 89.510 8.73e-94 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4258g00002 K02900 - thj:104822984 292.352