Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4256g00012 ATGGATATTCAAATTCCAGATTCTGGAGTTGAGTCTCATCAGGAGAGAAAATTCGCTCTTCCTGTGGATTCTGAAAACAAGGCCACTGAGTTCAAATTACTCTCGGTGGGGAAACCCCACATGCGAGCCTTCCATCTTTCTTGGATCTCCTTCTTTTCATGCTTCGTCTCTAGTTTCGCTGCTCCTCCTCTTCTTCCCATCATCCGTGATAACCTAAATCTCACTGCCACAGACATTGGAAATGCTGGGATTGCATCAGTTTCTGGTGCAGTTTTCGCTCGAATCGCAATGGGCACTGTGTGCGACTTGTTTGGCCCTCGTCTTGCTTCTGCTTCTCTCATTCTCATCACAGCACCAGCAGTATACTGCTCTTCCATTATCTCATCAGCTTCCTCCTACCTTCTGGCTCGCTTTTTCACAGGCTTCTCTTTAGCCACCTTCGTCTCAACCCAGTTTTGGATGAGTACCATGTTTTCTTCAAGAGTCGTTGGTACAGCCAATGGACTTGCAGCTGGATGGGGAAACCTAGGAGGAGGGGCCGCACAACTTCTTATGCCTATTGTGTTTGGAATCGTACGTGATATTGGTGCCGCGAAATTCACAGCATGGCGTATAGCATTCTTCATTCCTGCCATATTTCAAATGTCAACAGCATTTGCAGTGCTGATGTTTGGCCAGGATTTGCCAGAAGGGAACTTCCATACCTTGAAGAAATCAGGAGAAAAGGCAAAAGATGACTTTAAAAGAGTGTTGTTTTTCGGGATTTCAAATTACAGAGCGTGGGTTCTGGCAATCAATTATGGATATTGCTTTGGGGCAGAGCTAGCAATCAATAACATCATAGCTGAATACTTCTATGACAGGTTCAATCTGAATCTGCAGGTAGCAGGAATAATTGCTGCAAGCTTTGGCTTAGCTAATATATTTTCTCGACCTATTGGAGGCTTCATGTCAGATCTATTTGCCAAGAGGTATGGAATGAGAGGTAGGCTATGGGGTTTATGGCTGGTTCAAACCTTGCAAGGTGTGTTCTGTGTAATCCTCGGAAGGGTGGCATCTTTATCAGTATCCGTCATTGTCATGCTCATATTCTCTGTATTTATGCAAGCCGCCGAAGGGATGACGTTTGGGGTGGTTCCTTTTGTCTCAAGAAGATCACTGGGGGTCGTATCTGGAATGACAGGAGGTGGAGGTAATGTGGGCGCAGTTATAATACAGTTAATATTCTTCACAGGATCAAGATATTCAAAAGAAACTGGTATTACCTTAATGGGTATAATGATCATAGGCTGCACAGTGGTAGTAGGTTTGATATACTTCCCACAATGGGGTGGCATGTTTTGCGGCCCAAGGAAGCATGCTACAGAAGAAGATTATTACATGTCTGAGTGGAGCCCAGAGGAACAAGAGAAAGGGTCCCACCATGGAAGCCTGAAGTTTGCAGATAACAGCAAAAGTGAAAGAGGCTTGAGATCTCGATCTGCTGCAACCCAGCCTACGAATGAGGCCTCCCCAACACATGTTTGA 1527 0.4512 MDIQIPDSGVESHQERKFALPVDSENKATEFKLLSVGKPHMRAFHLSWISFFSCFVSSFAAPPLLPIIRDNLNLTATDIGNAGIASVSGAVFARIAMGTVCDLFGPRLASASLILITAPAVYCSSIISSASSYLLARFFTGFSLATFVSTQFWMSTMFSSRVVGTANGLAAGWGNLGGGAAQLLMPIVFGIVRDIGAAKFTAWRIAFFIPAIFQMSTAFAVLMFGQDLPEGNFHTLKKSGEKAKDDFKRVLFFGISNYRAWVLAINYGYCFGAELAINNIIAEYFYDRFNLNLQVAGIIAASFGLANIFSRPIGGFMSDLFAKRYGMRGRLWGLWLVQTLQGVFCVILGRVASLSVSVIVMLIFSVFMQAAEGMTFGVVPFVSRRSLGVVSGMTGGGGNVGAVIIQLIFFTGSRYSKETGITLMGIMIIGCTVVVGLIYFPQWGGMFCGPRKHATEEDYYMSEWSPEEQEKGSHHGSLKFADNSKSERGLRSRSAATQPTNEASPTHV 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4256g00012 508 FunFam Nitrate transporter 2.1 244 445 - -
Pral4256g00012 508 CDD MFS_NRT2_like 44 437 IPR044772 GO:0015112
Pral4256g00012 508 SUPERFAMILY MFS general substrate transporter 33 441 IPR036259 -
Pral4256g00012 508 Gene3D MFS general substrate transporter like domains 36 234 IPR036259 -
Pral4256g00012 508 MobiDBLite consensus disorder prediction 464 508 - -
Pral4256g00012 508 FunFam High affinity nitrate transporter 2.5 36 232 - -
Pral4256g00012 508 Gene3D MFS general substrate transporter like domains 243 444 IPR036259 -
Pral4256g00012 508 ProSiteProfiles Major facilitator superfamily (MFS) profile. 43 442 IPR020846 GO:0022857
Pral4256g00012 508 MobiDBLite consensus disorder prediction 490 508 - -
Pral4256g00012 508 MobiDBLite consensus disorder prediction 464 489 - -
Pral4256g00012 508 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 10 492 IPR044772 GO:0015112
Pral4256g00012 508 Pfam Major Facilitator Superfamily 48 404 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4256g00012 Pral-Chr4256 71633 73629 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4256g00012 16 499 Inorganic Solute Cotransporters AT1G12940 70.515 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4256g00012 K02575 - gmx:100787888 751.125