Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4256g00011 ATGGATATTTCAGATTCTGCAGTTGAGTCTCAGTTGAGAAAATTCGCTCTTCCTGTGGATTCTGAACACAAGGCAACTGAGTTCAGATTATTCTCAGTGGCTAAACCCCACATGCGAGCCTTCCATCTTTCTTGGATCTCCTTCTTCGCCTGCTTCGTCTCTAGCTTCGCTGCTCCTCCTCTCCTTCCTCTCATTCGTGATAATCTCAACCTCACAGCCACCGACATTGGAAATGCTGGGATTGCATCAGTTTCTGGTGCAGTTTTCGCTCGAATCGCTATGGGCACTGTGTGTGACTTGTTTGGCCCTCGTCTTGCTTCTGCTTCTCTCATTCTCCTGACAGTACCAGCAGTTTATTGTTCTTCCATTATCTCATCTTCTACCTCCTTCCTTCTGGTTCGCTTTTTCACAGGCTTCTCACTATCCACCTTCGTCTCAACTCAGTTCTGGATGAGCTCTATGTTCTCTACTCGAGTCGTTGCTTCAGCCAATGGACTTGCAGCTGGATGGGGAAACCTAGGAGGAGGAGCCACACAGCTTGTTATGCCTCTTGTATTTGCAATCGTTCGTGATATTGGTGCTGTCAAATTCACAGCATGGCGAATAGCGTTCTTCATTCCTGCGATATTTCAGATGTTAACAGCATTTGCAGTGTTCATATTTGGCCAGGATTTGCCAGATGGGAACTTCCATAACTTGAAGAAATCTGGGGAAAAGCCAAAGGATGACTTGAAAAGAGTTCTTTTCTTTGGGATCTCAAATTACAGAGGGTGGATTCTGGCTTTGACTTATGGATATTGCTTTGGGGTAGAGCTAGCAATAGATAATATCATAGCTGAGTACTTCTATGACAGATTTAATCTGAAACTTCATACAGCAGGACTAATTGCTGCAAGCTTTGGATTAGCCAATATATTTTCTCGACCTGGAGGAGGCTATATATCAGATTTAGTGGGGAAGAGGTTTGGAATGAGAGGTAGGCTTTGGGCCTTATGGCTGTGCCAAACCCTAGGAGGTGTGTTCTGTGTAATTCTTGGAAAGGTAGCATCTTTAACAGTATCCATCATTGTCATGATCATATTCTCTATATTTATTCAAGCTGCTTGTGGGATGACATTTGGGGTGGTTCCTTTTGTCTCAAGAAGGTCATTGGGGGTCATATCTGGAATGACAGGAGGCGGAGGAAATGTGGGTGCAGTTTTAACACAGTTAATATTCTTCACAGGATCGAAATACTCAAAGGAAACTGGTATTACCTTAATGGGCTTGATGATCATATGTTGTACACTCCCAATATGTCTGATATACTTCCCACAATGGGGCGGCATGTTTTGTGGGCCATCGTCGTCGAAGAGAGTTTCAGAAGAAGATTACTACCTGTCTGAGTGGAGCCCAGAGGAACAAGAGAAAGGGTCCCACCATGGAAGCTTGAAGTTTGCAGATAACAGCAGAAGTGAAAGAGGCATCAGAAGCAGTGCTCATCGCTCTACTGCAACTAATCCTTCTGATGACGCCACGCCACCAATTGTGTGA 1533 0.4449 MDISDSAVESQLRKFALPVDSEHKATEFRLFSVAKPHMRAFHLSWISFFACFVSSFAAPPLLPLIRDNLNLTATDIGNAGIASVSGAVFARIAMGTVCDLFGPRLASASLILLTVPAVYCSSIISSSTSFLLVRFFTGFSLSTFVSTQFWMSSMFSTRVVASANGLAAGWGNLGGGATQLVMPLVFAIVRDIGAVKFTAWRIAFFIPAIFQMLTAFAVFIFGQDLPDGNFHNLKKSGEKPKDDLKRVLFFGISNYRGWILALTYGYCFGVELAIDNIIAEYFYDRFNLKLHTAGLIAASFGLANIFSRPGGGYISDLVGKRFGMRGRLWALWLCQTLGGVFCVILGKVASLTVSIIVMIIFSIFIQAACGMTFGVVPFVSRRSLGVISGMTGGGGNVGAVLTQLIFFTGSKYSKETGITLMGLMIICCTLPICLIYFPQWGGMFCGPSSSKRVSEEDYYLSEWSPEEQEKGSHHGSLKFADNSRSERGIRSSAHRSTATNPSDDATPPIV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4256g00011 510 FunFam High affinity nitrate transporter 2.5 33 229 - -
Pral4256g00011 510 Gene3D MFS general substrate transporter like domains 248 440 IPR036259 -
Pral4256g00011 510 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 8 491 IPR044772 GO:0015112
Pral4256g00011 510 MobiDBLite consensus disorder prediction 464 491 - -
Pral4256g00011 510 CDD MFS_NRT2_like 41 434 IPR044772 GO:0015112
Pral4256g00011 510 Gene3D MFS general substrate transporter like domains 32 230 IPR036259 -
Pral4256g00011 510 Pfam Major Facilitator Superfamily 45 401 IPR011701 GO:0022857|GO:0055085
Pral4256g00011 510 SUPERFAMILY MFS general substrate transporter 32 437 IPR036259 -
Pral4256g00011 510 MobiDBLite consensus disorder prediction 464 510 - -
Pral4256g00011 510 FunFam Nitrate transporter 2.1 241 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4256g00011 Pral-Chr4256 62492 65339 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4256g00011 13 497 Inorganic Solute Cotransporters AT1G12940 74.639 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4256g00011 K02575 - gmx:100787888 808.905