Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4256g00008 ATGTCTGGTGTAACCCTTCTGCTTCTTCTCCTTTTTCGCTTCGCAGTTCCTTGTCTCTCTGATCCGAGAACTACAGAAGCAGCTCTGATGTGTGCAACAAACAAAACTACGCCATTTTCAGAACGCAATATCTTCTCAGACAATTTCTTAGCTGCATTACACGCCATGACTCCTTCGATTGATTCGCACGGATATGCGTCTGTTATTAATGGGACTGGAAATTCCACTGTTTATGCTTTCGCACAGTGCATGAAAGATCTATACAAATCGGATTGCAATATCTGCTTCGCGGAGATCAAGACTCAAGTCCCGAGGTGTTTACCATTTCAGAGAGGGACCCGCGGGGGAAGGGTGTTCTTTGATGGGTGTTATCTCAGGTACGATGATTACAACTTCTTCAATGAGAGTCTCAGTGATCAAGACAGAACTGTGTGTGGAAGCAAAGAGTTTGGTGGGAATCAGAGTATTTATGAGGCTAATGCAATGAAGTTAGTGAGGGATTTAAGTGCGGAAGCACCCAAAAATGATGGGTTCTTCGTGGGTTTTGTGAGAAGAAGAAATGTGACTGTCTATGGGTTGGCTCAGTGCTGGCAATTCGTTAATGGGAGTGCTTGTGAGAGATGTTTAGCAGAAGCTGTTAATAATATTAGTTCTTGTACCCCAAAAGAAGAAGGAAGAGTGCTGAATGCTGGATGTTATATGAGTTATTCAACCCAAAAGTTCTATGGCAACTCAACCGATCCCCCTACTGAAACTCATGGGAACAGCAGCAGTTACACTATAATGCTGGCCAGTGCTGGATCAGCTCTTGTACTGGCTGTTGCAGTAGTTGCCTTCTTTGCATGGAAGAGGATGCAGAGGAGGAAGAGAGCAAGAAGACAGTTCGGTGCACTTTTGGACAGAGTTCACAAGTCCAAGCTCAATATGACATATGAAGTTCTTGAAAGGGCAACAAATTACTTCAATGCCTCCAATAAGCTTGGACAAGGAGGTTCAGGTTCTGTTTATAAAGGAGTTCTGCCAGATGGGAATATCGTAGCTATAAAAAGGCTTAGCTTTCACACAACACAATGGGCAGATCATTTCTTCAATGAGGTTAATCTGATAAGTGGCATTCATCATAGAAATCTTGTAAGGCTTCTGGGTTGCAGCATTACAGGACCCGAAAGCCTTCTCGTTTATGAATACATGCCAAACCAAAGCGTTCATGACCACTTTTCTGCGAAGCAAAAATCTCAACCCTTGACTTGGGAAGCAAGGCGTAGAATTATATTGGGAACTGCAGAGGGATTGGCCTATCTCCATGAGGAATCACCAGTGAGAATTATTCATAGAGATATAAAACTAAGCAACATTATGCTTGAAAAGGACTTCACACCCAAGATAGCTGATTTTGGACTGGCTAGATTATTTCCAGAAGATGGGACTCACATTAGCACTACTGTTGCTGGCACACTCGGTTATATGGCTCCAGAATATGTTGTTCAGGGAAAATTATCAGAGAAAGCAGATGTTTATAGTTTTGGAGTCCTTCTAATTGAAATCATATCCGGAAAAAGGAGTAGTTCTTTTGTTCTAAATGCATCCTCCATCCTACAAGTGGCTTGGAATCTTCATAGGTCAGACAACCTAGGTAACATGGTAGATCCGAGCCTTCAAGACAATTATCCAGCGGAGGAAGCACGTCGGCTACTTCAGATAGGATTGCTTTGTACACAAGCATCAGCAAATCTACGACCGTCAATGTCAGAAGTGGTGAAAATGATGACTAGCAGTGAGGAAATTCCAGAGCCAACACAACCGCCATTTCTGGTTCCAAGCAGTATAGAATGCAGCAAATCTGAATATAACTTTCATACTTCATCCAACACAAATTCTTCAGAGGACAGCATGACTGAAAGCCTTATTCCTCCTGGATGA 1920 0.4271 MSGVTLLLLLLFRFAVPCLSDPRTTEAALMCATNKTTPFSERNIFSDNFLAALHAMTPSIDSHGYASVINGTGNSTVYAFAQCMKDLYKSDCNICFAEIKTQVPRCLPFQRGTRGGRVFFDGCYLRYDDYNFFNESLSDQDRTVCGSKEFGGNQSIYEANAMKLVRDLSAEAPKNDGFFVGFVRRRNVTVYGLAQCWQFVNGSACERCLAEAVNNISSCTPKEEGRVLNAGCYMSYSTQKFYGNSTDPPTETHGNSSSYTIMLASAGSALVLAVAVVAFFAWKRMQRRKRARRQFGALLDRVHKSKLNMTYEVLERATNYFNASNKLGQGGSGSVYKGVLPDGNIVAIKRLSFHTTQWADHFFNEVNLISGIHHRNLVRLLGCSITGPESLLVYEYMPNQSVHDHFSAKQKSQPLTWEARRRIILGTAEGLAYLHEESPVRIIHRDIKLSNIMLEKDFTPKIADFGLARLFPEDGTHISTTVAGTLGYMAPEYVVQGKLSEKADVYSFGVLLIEIISGKRSSSFVLNASSILQVAWNLHRSDNLGNMVDPSLQDNYPAEEARRLLQIGLLCTQASANLRPSMSEVVKMMTSSEEIPEPTQPPFLVPSSIECSKSEYNFHTSSNTNSSEDSMTESLIPPG 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4256g00008 639 ProSiteProfiles Gnk2-homologous domain profile. 138 241 IPR002902 -
Pral4256g00008 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Pral4256g00008 639 Gene3D - 140 241 IPR038408 -
Pral4256g00008 639 Gene3D - 24 132 IPR038408 -
Pral4256g00008 639 MobiDBLite consensus disorder prediction 615 633 - -
Pral4256g00008 639 Pfam Salt stress response/antifungal 31 130 IPR002902 -
Pral4256g00008 639 Pfam Salt stress response/antifungal 149 238 IPR002902 -
Pral4256g00008 639 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 78 627 - -
Pral4256g00008 639 FunFam Cysteine-rich receptor-like protein kinase 2 285 396 - -
Pral4256g00008 639 SUPERFAMILY Protein kinase-like (PK-like) 307 618 IPR011009 -
Pral4256g00008 639 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Pral4256g00008 639 FunFam Cysteine-rich receptor-like protein kinase 2 24 132 - -
Pral4256g00008 639 Gene3D Phosphorylase Kinase; domain 1 281 396 - -
Pral4256g00008 639 Gene3D Transferase(Phosphotransferase) domain 1 397 599 - -
Pral4256g00008 639 ProSiteProfiles Protein kinase domain profile. 321 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4256g00008 639 ProSiteProfiles Gnk2-homologous domain profile. 24 132 IPR002902 -
Pral4256g00008 639 Pfam Protein kinase domain 322 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4256g00008 639 FunFam Cysteine-rich receptor-like protein kinase 3 141 241 - -
Pral4256g00008 639 CDD STKc_IRAK 327 590 - -
Pral4256g00008 639 MobiDBLite consensus disorder prediction 615 639 - -
Pral4256g00008 639 SMART serkin_6 321 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4256g00008 639 FunFam Cysteine-rich receptor-like protein kinase 2 397 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4256g00008 Pral-Chr4256 50677 53609 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4256g00008 17 486 Receptor kinase-like Gene Family AT1G70530 60.042 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4256g00008 Pkinase 8.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4256g00008 - - gmx:100305402 836.639