Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4256g00007 ATGAAGAAGGCAGTCCAATTAGCCTCTTGTCAATCCCTTATTCTCCTTCTAATCAAATCATTACTACCACTATTTATGCTGCCAGAAACAGTAGTGGCAGATCCGAGAACCAAGACAGTGCAAATAATGTGTGGAAGACAGACAGAGCACAATATCACAAACTTTGTGTCAAATTTTGTTACAACCATGGATGTTATCAGTGATCAGATGCGCCATGATGGGTATGGCACAGCAGTTTCAGGGAGAGGTCCTGATACTAACTATGGCCTTGCTGAGTGCTATGGTGATCTTTCCTTACTTGACTGTGTCCTATGTTATGCTGAGGCACGAACAGTTCTTCCTAAGTGCTTCCCCAGCAATAGTGGTCGTATATACCTTGATGGTTGCTTTATGAGGGCTGAGAATTACAGCTTCTTTCATGAGTACAGAGGAGAAGAAGACAGGGCTGTGTGCGGAAACACAACCAGAAAAGGCTCGAGTTTTCAAGCAACAGTGAAGCAGGCGGTTCTGAGTGCAGTTGAAACCGCAACAAATAATGACGGGTATGCCAGGGGGAAGGTTGCTGTATCAGGAACAGCAAATGAGTCAGCTCATGTTCTGGCTAATTGTTGGCAAAGTTTGAACACAAGCTCCTGTAAAGCTTGTCTTGAAGATGCTTCTTCTTCGATATTCGGATGCTTGCCCTGGTCGGAAGGAAGAGCTCTGAATACTGGCTGCTTCATGAGGTATTCAGACACAGATTTCCTGAACAAGGAACTGGAAAGTAAAAGCTCATCAGGTAATATAGTAGTGCTAGTGGTTGCAATTGTCAGTTCAGTGATTGTTTTCGTGGTTGCAACTGCCTTCGGGGTTTATGTCTGGAAACAGAGATACATTCAAATGAAACGGAGAGCTTCAAATGACGTAGAAAAGTTAGCAAAGACCCTTCACCACAACGGCTTGAACTTCAAGTACTCAACATTGGAGAGGGCAACCGACTCTTTCGATGTTGCTAACAAGCTTGGACAAGGAGGGTTTGGGACAGTTTACAAAGGAATTTTGCCTGATGGAAGAGAGATTGCAGTCAAGAGGTTATATTTTAACAACAGACATAGAGCAGAAGATTTCTATAATGAAGTCAACATAATCAGCAGCGTGGAACATAAAAATCTAGTCAGATTGTTAGGATGCAGTTGTGCAGGGCCTGAAAGCCTTCTTGTTTATGAGTATCTACCCAACAGAAGTCTTGATCGTTTCATTTTTGATAAAAACAGAGGCAAGGAACTAAACTGGGATAGGAGATATGAGATTATCATTGGGACTGCAGAAGCATTAGTCTACCTGCACGAGAAGTCCAAGATTAAGATAATTCATAGAGATATAAAAGCCAGCAATATCTTACTGGACGCAAGGCTTCGAGCTAAAATTGCAGACTTTGGTTTGGCTAGGTCTTTCCAAGAAGAAAAAAGCCACATCAGTACAGCTATTGCAGGAACTTTAGGGTATATGGCTCCAGAGTACCTAGCTCATGGTCAATTAACAGAGAAAGCAGATGTATATGGTTTTGGTGTGCTTCTGCTAGAAATAGTTACTGGGAGACAGAATAACAGAAGCAAAGCATCAGAATATTCAGACAGCCTAATTACAGTGACATGGAAGCATTTTCAGTCAGGGACAGCAGGACAACTACTTGATCCAAATCTAACATCGCAGGAAAACCACAATAGCGATGTTAAAGATGAAATTCTAAGAGTGGTGCACATAGGACTTCTATGCACTCAAGAGATCTCTTCATTGCGACCAACTATGGCAAAAGCTTTAGAGATGCTAACTAAGAAGGAGGAGCAACTTCCTGCTCCCTCAAATCCACCCTTCATAGATGAAAGCACAATGGAACTCCAAGACATATATGGTGATCCATTCTATCCTCTCAATGCAGCAGATTCAATTGCTACTATGTCCCACAGCGAATTTTACCCCAGGTGA 1965 0.4234 MKKAVQLASCQSLILLLIKSLLPLFMLPETVVADPRTKTVQIMCGRQTEHNITNFVSNFVTTMDVISDQMRHDGYGTAVSGRGPDTNYGLAECYGDLSLLDCVLCYAEARTVLPKCFPSNSGRIYLDGCFMRAENYSFFHEYRGEEDRAVCGNTTRKGSSFQATVKQAVLSAVETATNNDGYARGKVAVSGTANESAHVLANCWQSLNTSSCKACLEDASSSIFGCLPWSEGRALNTGCFMRYSDTDFLNKELESKSSSGNIVVLVVAIVSSVIVFVVATAFGVYVWKQRYIQMKRRASNDVEKLAKTLHHNGLNFKYSTLERATDSFDVANKLGQGGFGTVYKGILPDGREIAVKRLYFNNRHRAEDFYNEVNIISSVEHKNLVRLLGCSCAGPESLLVYEYLPNRSLDRFIFDKNRGKELNWDRRYEIIIGTAEALVYLHEKSKIKIIHRDIKASNILLDARLRAKIADFGLARSFQEEKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYGFGVLLLEIVTGRQNNRSKASEYSDSLITVTWKHFQSGTAGQLLDPNLTSQENHNSDVKDEILRVVHIGLLCTQEISSLRPTMAKALEMLTKKEEQLPAPSNPPFIDESTMELQDIYGDPFYPLNAADSIATMSHSEFYPR 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4256g00007 654 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Pral4256g00007 654 FunFam Putative DUF26-domain receptor-like protein kinase family protein 290 403 - -
Pral4256g00007 654 FunFam Cysteine-rich receptor-like protein kinase 2 37 138 - -
Pral4256g00007 654 FunFam Cysteine-rich receptor-like protein kinase 2 404 611 - -
Pral4256g00007 654 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 88 624 - -
Pral4256g00007 654 ProSiteProfiles Protein kinase domain profile. 328 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4256g00007 654 CDD STKc_IRAK 334 605 - -
Pral4256g00007 654 Gene3D Transferase(Phosphotransferase) domain 1 404 614 - -
Pral4256g00007 654 SUPERFAMILY Protein kinase-like (PK-like) 313 626 IPR011009 -
Pral4256g00007 654 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Pral4256g00007 654 ProSiteProfiles Gnk2-homologous domain profile. 37 138 IPR002902 -
Pral4256g00007 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Pral4256g00007 654 SMART serkin_6 328 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4256g00007 654 Gene3D - 148 248 IPR038408 -
Pral4256g00007 654 Gene3D - 36 138 IPR038408 -
Pral4256g00007 654 FunFam Cysteine-rich receptor-like protein kinase 3 147 248 - -
Pral4256g00007 654 Pfam Salt stress response/antifungal 154 245 IPR002902 -
Pral4256g00007 654 Pfam Salt stress response/antifungal 51 136 IPR002902 -
Pral4256g00007 654 Pfam Protein kinase domain 330 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4256g00007 654 Gene3D Phosphorylase Kinase; domain 1 288 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4256g00007 Pral-Chr4256 41663 46241 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4256g00007 14 654 Receptor kinase-like Gene Family AT1G70520 65.635 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4256g00007 Pkinase 8.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4256g00007 - - gmx:100305420 1028.08