Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4254g00073 ATGTCAACACTTAACGAGCTTCATCTTCAAGAACAGATATGCTACGTGCAATGTGGAGTCTGCAGCACCATGTTACTGGTCAGTGTCCCACCCAGCAGTTTATCAATGGAGGTGACTGTAAAATGTGGAAACTGCACAAACCTCCTTTCTATTAATATGATGAAAGCTTCTTTTGTCCCTTTTCAACTCTTTCCTTCCCAGTTTACTTATGCTGTTCAGCCAAAAGAAGGTAGTCCAGAAGAAAACGCAGACAAGAGTCCTTGTTCTGATAGTGGGGAAGAAGATGCGATCCCAATGAGTGATGCCATTAATGAACGGAAAAGGCAGAAAAAACCATCGGCCTATAATCGCTTCATCCGAGAAGAGATCAGAAGGCTGAAGGCTGAGAACCCAGACATGGTCCACAAGGAAGCTTTCAGAACAGCAGCCAAAAATTGGGCCAACTTCCCTCAAGCTCAATCTAAAGAAGAAGATGAAGAAAGCTGTAGCCATGTGGATCCACATGAAGATGCTGAGAAGGAAAAATCATAG 531 0.435 MSTLNELHLQEQICYVQCGVCSTMLLVSVPPSSLSMEVTVKCGNCTNLLSINMMKASFVPFQLFPSQFTYAVQPKEGSPEENADKSPCSDSGEEDAIPMSDAINERKRQKKPSAYNRFIREEIRRLKAENPDMVHKEAFRTAAKNWANFPQAQSKEEDEESCSHVDPHEDAEKEKS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4254g00073 176 PANTHER PROTEIN YABBY 6-RELATED 1 161 IPR006780 GO:0007275
Pral4254g00073 176 MobiDBLite consensus disorder prediction 99 114 - -
Pral4254g00073 176 Gene3D High mobility group box domain 102 175 IPR036910 -
Pral4254g00073 176 MobiDBLite consensus disorder prediction 73 114 - -
Pral4254g00073 176 MobiDBLite consensus disorder prediction 153 176 - -
Pral4254g00073 176 Pfam YABBY protein 9 153 IPR006780 GO:0007275
Pral4254g00073 176 CDD HMG-box_SF 110 153 - -
Pral4254g00073 176 MobiDBLite consensus disorder prediction 145 176 - -
Pral4254g00073 176 SUPERFAMILY HMG-box 104 153 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4254g00073 Pral-Chr4254 467758 469520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4254g00073 2 162 C2C2-YABBY Transcription Factor Family AT1G23420 49.171 2.91e-48 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Pral4254g00073 YABBY 1.4e-45 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4254g00073 K25796 - gmx:100806755 207.608