Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4254g00011 ATGCCATTTGGGTTGGTCTCAGCCTGGAACAAGCGTCGCAGAAGCAAGTCTCAAGACCATACAGACCCCTGGATTTACAAACCTCTGGAGTTTTGGCAACTTGAAGAACAAGCAACCCGGCCCACAAAAAGGCAGCATGGGTCATCAGTATACACACTCAAGGAGATGGAAGAGGCAACAGGATCATTCAGTGATGATAATCTGCTCGGAAAGGGAGGATTTGGCAGAGTGTACAGAGGCGCTTTGCGTTCTGGAGAGGTTGTAGCAATCAAGAAAATGGATCTGCCAGCAATTAAAGAAGCAGAAGGAGAGCGAGAGTTCCGTGTTGAAGTTGACATCTTGAGTAGACTTGACCACCCGAATCTTGTTTCTCTAATAGGCTATTGCGCTGATGGAAAGCACCGGTTCCTGGTGTATGAATATATGCATAACGGGAACCTGCAAGATCATTTGAATGGAATTGGGCAGAGAAAAATGGATTGGCCTCAAAGACTCAAAGTGGCACTGGGAGCAGCAAGAGGTTTAGCATATCTCCATTCAAGTTCTGCTGTTGGAATTCCTATTGTTCACAGAGACTTCAAATCCACCAATGTTCTCTTAAATGCCAATTTTGAACCCAAGATATCTGATTTTGGGCTAGCTAAGTTAATGCCAGAGGGACAGGAGACACACGTGACCGCCAGAGTGCTTGGGACATTTGGTTACTTTGACCCTGAGTATACATCGATAAGTCAGGTTAACAGTTCCCCTCTAGCATGGGCAAGGGAAGACGTTCCCATTCACTCAATCTTTTGCCTTTGTAATTATTACTCAACAATTTTTTTTGTAGCCGACCCCATCTAG 843 0.452 MPFGLVSAWNKRRRSKSQDHTDPWIYKPLEFWQLEEQATRPTKRQHGSSVYTLKEMEEATGSFSDDNLLGKGGFGRVYRGALRSGEVVAIKKMDLPAIKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMHNGNLQDHLNGIGQRKMDWPQRLKVALGAARGLAYLHSSSAVGIPIVHRDFKSTNVLLNANFEPKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSISQVNSSPLAWAREDVPIHSIFCLCNYYSTIFFVADPI 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4254g00011 280 Pfam Protein kinase domain 64 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4254g00011 280 Gene3D Transferase(Phosphotransferase) domain 1 142 253 - -
Pral4254g00011 280 ProSiteProfiles Protein kinase domain profile. 63 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4254g00011 280 SUPERFAMILY Protein kinase-like (PK-like) 45 244 IPR011009 -
Pral4254g00011 280 FunFam Os07g0541700 protein 142 232 - -
Pral4254g00011 280 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Pral4254g00011 280 Gene3D Phosphorylase Kinase; domain 1 30 141 - -
Pral4254g00011 280 FunFam serine/threonine-protein kinase PBS1-like 31 141 - -
Pral4254g00011 280 PANTHER OS01G0750732 PROTEIN 28 246 - -
Pral4254g00011 280 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4254g00011 Pral-Chr4254 57374 60807 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4254g00011 45 241 Receptor kinase-like Gene Family AT3G58690 49.505 5.05e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Pral4254g00011 Pkinase 5.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4254g00011 - - hbr:110640897 451.44