Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4254g00010 ATGCCATTTGGGTTGGTCTCAGCCTGGAACAAGCGTCGCAGAAGCAAGTCTCAAGACCATACAGACCCCTGGATTTACAAACCTCTGGAGTTTTGGCAACTTGAAGAACAAGCAACCCGGCCCACAAAAAGGCAGCATGGGTCATCAGTATACACACTCAAGGAGATGGAAGAGGCAACAGGATCATTCAGTGATGATAATCTGCTCGGAAAGGGAGGATTTGGCAGAGTGTACAGAGGCGCTTTGCGTTCTGGAGAGGTTGTAGCAATCAAGAAAATGGATCTGCCAGCAATTAAAGAAGCAGAAGGAGAGCGAGAGTTCCGTGTTGAAGTTGACATCTTGAGTAGACTTGACCACCCGAATCTTGTTTCTCTAATAGGCTATTGCGCTGATGGAAAGCACCGGTTCCTGGTGTATGAATATATGCATAACGGGAACCTGCAAGATCATTTGAATGGAATTGGGCAGAGAAAAATGGATTGGCCTCAAAGACTCAAAGTGGCACTGGGAGCAGCAAGAGGTTTAGCATATCTCCATTCAAGTTCTGCTGTTGGAATTCCTATTGTTCACAGAGACTTCAAATCCACCAATGTTCTCTTAAATGCCAATTTTGAACCCAAGATATCTGATTTTGGGCTAGCTAAGTTAATGCCAGAGGGACAGGAGACACACGTGACCGCCAGAGTGCTTGGGACATTTGGTTACTTTGACCCTGAGTATACATCGACGGGGAAACTCACTCTACAAAGTGATGTTTATGCTTTTGGAGTTGTTCTTCTTGAGCTTTTGACAGGACGTCGAGCTATAGATTTAAACCAAGGTCCAAATGATCAAAACCTTGTATTACAGGTGAGGAACATACTGAATGACCGCAAGAGGCTCCGCAAGGTGATAGACCCAGAAATGGCTCGAAATTCTTATACCATCGAGTCCGTAGCTATGTTTGCCAATCTTGCATCACGATGTATCCGTACTGACAGTAGTGAGAGGCCTTCTATGGCAGAATGTGTAAAAGAGCTGCAAATGATAATCTATACTAATTCAAAAGGCTTGGCAATGGTTATGCATAGTTTGAGAATGATCTAG 1086 0.4438 MPFGLVSAWNKRRRSKSQDHTDPWIYKPLEFWQLEEQATRPTKRQHGSSVYTLKEMEEATGSFSDDNLLGKGGFGRVYRGALRSGEVVAIKKMDLPAIKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMHNGNLQDHLNGIGQRKMDWPQRLKVALGAARGLAYLHSSSAVGIPIVHRDFKSTNVLLNANFEPKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAIDLNQGPNDQNLVLQVRNILNDRKRLRKVIDPEMARNSYTIESVAMFANLASRCIRTDSSERPSMAECVKELQMIIYTNSKGLAMVMHSLRMI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4254g00010 361 FunFam receptor-like serine/threonine-protein kinase NCRK 142 352 - -
Pral4254g00010 361 ProSiteProfiles Protein kinase domain profile. 63 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4254g00010 361 PANTHER OS01G0750732 PROTEIN 28 345 - -
Pral4254g00010 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Pral4254g00010 361 Gene3D Transferase(Phosphotransferase) domain 1 142 355 - -
Pral4254g00010 361 Pfam Protein kinase domain 64 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4254g00010 361 SUPERFAMILY Protein kinase-like (PK-like) 49 349 IPR011009 -
Pral4254g00010 361 PIRSF ILK 32 354 - -
Pral4254g00010 361 FunFam serine/threonine-protein kinase PBS1-like 31 141 - -
Pral4254g00010 361 Gene3D Phosphorylase Kinase; domain 1 30 141 - -
Pral4254g00010 361 CDD STKc_IRAK 69 341 - -
Pral4254g00010 361 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4254g00010 Pral-Chr4254 56365 60802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4254g00010 45 344 Receptor kinase-like Gene Family AT3G58690 45.246 2.78e-90 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Pral4254g00010 Pkinase 1.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4254g00010 - - gmx:100796654 657.521