Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4253g00001 ATGTCGGTTTCTTGTGCTGACTACTTCCCCGATTCCGACCTTCTCTGCGACGAGGACACGTCCGGAATCTTGTCCAGAGAGTCGACGGAGTGCTCCTCCGACCTCGATTCCTCTCCGTCGTCCACGGAGGAGTCGATTGCTGGATTCATCGAACACGAGCGCAGCTTCGTTCCGGGATGCGACTACTTTTCCAGGTTTCAATCTCAATCGCTTGACGCCTCCGCGAGAGAGGAATCTGTTGCATGGATTCTCAAGGTACAAGCTTACTTTGGATTTCAGCCACTGACGGCGTATCTTTCCGTCAACTACATGGATCGGTTTTTGGATGCTCGGCGGTTGCCGCAAGCAAATGGGTGGCCACTGCAACTTCTGTCCGTTGCTTGTTTGTCTTTAGCTGCAAAGATGGAGGAACCCTTGGTTCCGCCCCTTGTGGATCTTCAGGTAGAAGGTGCCAAATACATCTTTGAGCCGAAGACGATTCGTCGGATGGAACTGCTTGTTCTAGGTGCTCTGGATTGGAGACTAAGATCAGTCACGCCGTTCAACTTCCTCAGTTTCTTTGCGTACAAGCTCGATTCAACTGGAACTTTCACTGGCTTCCTTATCTCACGAGCTACAGAAATCATCTTATCAAATATCCAAGAGGCTAGTTTTCTTGCGTACTGGCCATCATGCATTGCTGCCGCTTCCATACTCTGTGCCGCGAATGAAATTCCTAATTGGTCTCTAGTCAGGCCTGAGCATGCTGAGTCATGGTGTGAGGGGCTTAGAAAAGAGAAGATCATAGGTTGCTACCAATTCATGCGAGACTTTGTGATCACCAATAGCCAGACGAAGCCCCCTAAAGTGTTCCCACAGCTTCGAGTAACGACGAGGTTCACAACAAAGTCAAGTATGTCATCATACTCATCGCCTTCCTCTTCCTCCTCGTCCTCATCGCCTTACAAAAGGAGGAAATTAAATAACTGCCTGTGGGTAGATGATGATGACAAAGGACACTCCGAGTGA 1008 0.494 MSVSCADYFPDSDLLCDEDTSGILSRESTECSSDLDSSPSSTEESIAGFIEHERSFVPGCDYFSRFQSQSLDASAREESVAWILKVQAYFGFQPLTAYLSVNYMDRFLDARRLPQANGWPLQLLSVACLSLAAKMEEPLVPPLVDLQVEGAKYIFEPKTIRRMELLVLGALDWRLRSVTPFNFLSFFAYKLDSTGTFTGFLISRATEIILSNIQEASFLAYWPSCIAAASILCAANEIPNWSLVRPEHAESWCEGLRKEKIIGCYQFMRDFVITNSQTKPPKVFPQLRVTTRFTTKSSMSSYSSPSSSSSSSSPYKRRKLNNCLWVDDDDKGHSE 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4253g00001 335 PANTHER CYCLINS 44 274 IPR039361 -
Pral4253g00001 335 MobiDBLite consensus disorder prediction 296 316 - -
Pral4253g00001 335 SUPERFAMILY Cyclin-like 39 175 IPR036915 -
Pral4253g00001 335 ProSitePatterns Cyclins signature. 76 107 IPR006671 -
Pral4253g00001 335 Gene3D - 50 239 - -
Pral4253g00001 335 Gene3D - 59 176 - -
Pral4253g00001 335 Pfam Cyclin, N-terminal domain 48 175 IPR006671 -
Pral4253g00001 335 SMART Cyclin_C_2 178 307 IPR004367 -
Pral4253g00001 335 FunFam D2/4-type cyclin 59 176 - -
Pral4253g00001 335 CDD CYCLIN_AtCycD-like_rpt1 75 173 - -
Pral4253g00001 335 Pfam Cyclin, C-terminal domain 178 291 IPR004367 -
Pral4253g00001 335 SUPERFAMILY Cyclin-like 160 283 IPR036915 -
Pral4253g00001 335 CDD CYCLIN_AtCycD-like_rpt2 178 268 - -
Pral4253g00001 335 SMART cyclin_7 81 169 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4253g00001 Pral-Chr4253 16053 19803 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4253g00001 1 329 Core Cell Cycle Gene Families AT1G70210 65.165 6.81e-139 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4253g00001 K18810 - gmx:100775224 478.789