Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4252g00011 ATGACGGAGGCTGTGATTAAGGCTGCACTTGAAAGTTTGAGCTCACTCATTCAGAAAGAGCTCTGTTTGTTTCTGGGTGTCGGGAGAGAAATGAGAAGGCTTTCAGGGGTCCTCACTAGAATTAAGGCTGTGCTCGAAGAGGCTGAGAAGAAGCAGCTCACCAACAAATCTCTCAAGTATTGGCTGCTCGACCTTCGAGATGCAGCTTACTTGCTGGATGACATCTTGGATGAGTGTTCCACGGAGGCCCTTTCGTTGGAATACCAAGAGGAGGTACAAGCCTCTTGCTTATACTATTTCAATCTCTCTCATGTTATGTTCCGCTGCAAAATTGCCAAGAAATTGAAAGGCATCAGTCAAAGACTTTATCAAATTGATGAGGAAAAGTCGAGGTTTCAGTTAAGCGAGACGGTTCACGAGGGGAAGAATGAAGTGATGGAACGGCGGCAAACTACCTCAATCATTACTCAAACCCGATTCTTTGGAAGAGAAGCAGACAAGGAGACAATTGTGGACTTTTTGGTTGGTGATGCTTCTAATTTGGAGGACGTATCAGTGTATCCAGTTACTGGTATTGGCGGTCTCGGGAAAACTACCCTTGCCCAGCACGTCTTCCATGATCAGAGGGTGGTTAGTCATTTTGAGCCACGAATTTGGGTATGTGTTTCTGAGAATTTCAATTTGAAAAGGCTGTCAAAAGATATAATAGAGTCAGCTACAAGGCAACCTTGTGGAGATTTAGGTTTAGAACCATTACAAGGACGGGTCCAACAGGAGCTTGGAGGAAAAAGATATTTGCTTGTCCTGGACGACGTGTGGAATGATAACCAGGGGAAATGGGATGAGTTGAAATATGTTTTGGCCTGTGGATCAAAGGGTGCTTCGATTCTGGTCACTACCCGTCTTAGAACAGTTGCATCCATTACAGGAACAGTGTCTGCTCCTCATGAGTTATCACAGTTGTCAGAAGATGATTGTTGGGAGTTATTCAGACAACGAGCTTTTGGATCGAAGGAGGAGGCACGCGAAGAACTTATAACTATCGGGAGGGAGATAGTAAGGAAATGCAACGGAGTTCCACTTGCTGCTAAAACTTTAGGAGGTCTTCTGCGTTTCCAACGTAATGAAGATGAGTGGCTCCGCATCAAGGAAAGTCAGATTTGGAATTTACCACAGGAAGAAGATTCTATCCTGCCTGCTTTAAGATTAAGTTATTTGAATTTATCAGCAAAATTAAGACGTTGTTTTGCCTACCTTGCAGTGTTTCCCAAAGATCGAGGGATGAGTAAGAAAAAGGTAATAGAACTTTGGATGGCTAATGGGTTCCTTTCAACAGATGAAGGGTTTGAATTGGAAGGTGATGGTGACAGAGTGTGGAATGAATTATATTTAAAGTCATTTTTTGTGGATGTTGAGATAGATGAATCTGCATACGACACATGGTTCAAGATCCATGATCTTGTTCATGACTTAGCCCAGTCTGTGATGGGGGAAGAATGTTATAGCGGAACACTTGAGAATGGCCCACTTGTTGAAAGAACTTATCACCTCTCACTTGGTGACGTTGATCAATCTTCTAACCTATGGTCATCCTATTTGAACAAGGTCAAATTCTTAAAAACATTTATAATGCTAGAGGATTATTATTCTCAGGTCGACACTTGTTGTGATGGATTGCTGAAATGTTATCATTTGCGAGCGTTTGACCTCAAGTTTTCAAATGAGGTGTCATCTTCCATTGACCAATTAAAACATCTGAGGTACTTGAACCTTTCTCATGGTCGGTTTACAATACTTCCTGATTCGATATGTAGATTGTGGAACTTGCTAATTTTGAATTTGAACATGTGTGATTCTCTCAAAATGTTGCCTAATAAGTTGAAGTGCTTAAAATCTCTCCGTCATCTACATTTGGAAGGGTGTTTGTCATTATCTAGAATGGCCCCTGGGATGCGTCAACTAACTTGCTTGAAAACCTTAAGTGCATATGTTGTCGATGTGCAGGAAGGGTTCTTATTGGAAGAAGTAGAGAATTTGAACCTTGAAGGAACACTCTCCATCAAGCGCTTGGAGAGAGTAACAAGTGAGACGGATGCCAGAAAGGCCAGGTTGGCTGATAAGCGCCTCAACAAGCTGGAGTTGTCTTGGGAAAGGAATGAGCAATCCCAATTACAAGAAAATGAGGAGAAAATTCTTGAAGTTCTTCAACCTCACGCGCAACTTAAAAGTTTGATTGTAAAAGGATATCTTGGTACCCAACTCCCACAATGGATGATCAATCCCACGCTCAAGCATTTAATTTCCCTACAGCTCGTGGGTTGTAAAAGTCTTGTGTGCATTTCATGCCTAGCAAAACTTCCGACTTTGAAGCGTTTGAGCTTGACGGACATGAATCACGTGCAATATATAGATGAGGAACCTTATGTTTATGGGGTTGACAGAGGTTTCCAAGTTCTGGAAAAGCTACAGCTGTCAGAGCTACTAAGCCTCGTAAAGTTGTCAAGGGAGGATGGAGACAACATGTTCCCACGTCTCTCAACGTTGGACGTCACTAATTGTCCGCAACTAAACTTGCCTTTCCTTCCATCCGTCACTCAACTACAAGTTGCAAGGGGATGTAGCAAGGTGTGTGTTGGTTCAATTCAAAATCTGCCCAATCTTGAACGCCTTCTTTTGAATGGATATGTAGGGTTGACTCCCCCTCCAGAAAAGATGTTAGAGGGCCTTCAGCACCTCAAAGAACTCCGACTTTTCTGTTTTCCCAAACTTGAAGTTCTCCCAACTGGACTCGCCAACTCGAAGGCTCTCGAACAATTGCACATTAGTTATTGCGAGAACCTTGAGACAATAACAGAGGAAGTGTTGCAAGGGTGGTGTTCTCTTAAAATATTCCGTATTTGGGGGTGTCCTAAGTTCAAACTGTCTGCAGGTTTCGGACACTTCATAGCCCTTGAACTTCTAACTATTGCCGGATGCGCAAGGCTGGAAGATATCCCTGATGATTTACAGCATATTATGACCCTTCGATCGTTGCAATTGCGTGATCTCCCAAATCTAGCCTCCTTGCCTGACTGGTTGGGGAACCTTGGGTTGCTTAAGTCATTGGATATATACGAATGCCCCAAGTTGATGTCACTTCCAACGAGTATTCAGAGCCTTGCAAATTTGAAATCTTTGTCCATTTACGGTTGTCCGGAGTTAGGGAAGAGATGCAACGAGAAAACAGGGGAGGATTGGCACAAAATTGCTCGTGTTCCATATCTTTCTATAGGAGATTAA 3279 0.4288 MTEAVIKAALESLSSLIQKELCLFLGVGREMRRLSGVLTRIKAVLEEAEKKQLTNKSLKYWLLDLRDAAYLLDDILDECSTEALSLEYQEEVQASCLYYFNLSHVMFRCKIAKKLKGISQRLYQIDEEKSRFQLSETVHEGKNEVMERRQTTSIITQTRFFGREADKETIVDFLVGDASNLEDVSVYPVTGIGGLGKTTLAQHVFHDQRVVSHFEPRIWVCVSENFNLKRLSKDIIESATRQPCGDLGLEPLQGRVQQELGGKRYLLVLDDVWNDNQGKWDELKYVLACGSKGASILVTTRLRTVASITGTVSAPHELSQLSEDDCWELFRQRAFGSKEEAREELITIGREIVRKCNGVPLAAKTLGGLLRFQRNEDEWLRIKESQIWNLPQEEDSILPALRLSYLNLSAKLRRCFAYLAVFPKDRGMSKKKVIELWMANGFLSTDEGFELEGDGDRVWNELYLKSFFVDVEIDESAYDTWFKIHDLVHDLAQSVMGEECYSGTLENGPLVERTYHLSLGDVDQSSNLWSSYLNKVKFLKTFIMLEDYYSQVDTCCDGLLKCYHLRAFDLKFSNEVSSSIDQLKHLRYLNLSHGRFTILPDSICRLWNLLILNLNMCDSLKMLPNKLKCLKSLRHLHLEGCLSLSRMAPGMRQLTCLKTLSAYVVDVQEGFLLEEVENLNLEGTLSIKRLERVTSETDARKARLADKRLNKLELSWERNEQSQLQENEEKILEVLQPHAQLKSLIVKGYLGTQLPQWMINPTLKHLISLQLVGCKSLVCISCLAKLPTLKRLSLTDMNHVQYIDEEPYVYGVDRGFQVLEKLQLSELLSLVKLSREDGDNMFPRLSTLDVTNCPQLNLPFLPSVTQLQVARGCSKVCVGSIQNLPNLERLLLNGYVGLTPPPEKMLEGLQHLKELRLFCFPKLEVLPTGLANSKALEQLHISYCENLETITEEVLQGWCSLKIFRIWGCPKFKLSAGFGHFIALELLTIAGCARLEDIPDDLQHIMTLRSLQLRDLPNLASLPDWLGNLGLLKSLDIYECPKLMSLPTSIQSLANLKSLSIYGCPELGKRCNEKTGEDWHKIARVPYLSIGD 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4252g00011 1092 Gene3D - 5 122 - -
Pral4252g00011 1092 CDD RX-CC_like 3 125 IPR038005 -
Pral4252g00011 1092 Gene3D - 141 312 IPR027417 -
Pral4252g00011 1092 Gene3D Ribonuclease Inhibitor 880 1077 IPR032675 -
Pral4252g00011 1092 Gene3D Ribonuclease Inhibitor 513 665 IPR032675 -
Pral4252g00011 1092 Gene3D Ribonuclease Inhibitor 671 871 IPR032675 -
Pral4252g00011 1092 Pfam NB-ARC domain 164 405 IPR002182 GO:0043531
Pral4252g00011 1092 Gene3D - 410 494 IPR036388 -
Pral4252g00011 1092 Pfam Rx N-terminal domain 5 87 IPR041118 -
Pral4252g00011 1092 Gene3D - 320 409 IPR042197 -
Pral4252g00011 1092 PRINTS Disease resistance protein signature 259 273 - -
Pral4252g00011 1092 PRINTS Disease resistance protein signature 356 370 - -
Pral4252g00011 1092 PRINTS Disease resistance protein signature 840 856 - -
Pral4252g00011 1092 PRINTS Disease resistance protein signature 186 201 - -
Pral4252g00011 1092 Coils Coil 31 51 - -
Pral4252g00011 1092 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 419 IPR027417 -
Pral4252g00011 1092 SUPERFAMILY L domain-like 483 868 - -
Pral4252g00011 1092 SUPERFAMILY RNI-like 877 1070 - -
Pral4252g00011 1092 PANTHER DISEASE RESISTANCE PROTEIN RP 54 824 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4252g00011 Pral-Chr4252 124548 127826 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4252g00011 909 1067 WRKY Transcription Factor Family AT4G12020 27.044 6.38e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4252g00011 - - tpra:123906781 994.956