Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4252g00010 ATGACGGAGGCTATGATTGACGTTGCACTTGACACTTTGAGCTCACTCATTCAGAAAGAGCTCGGTTTGTTTCTGGGTGTCGGTGGAGAAATGAGAAGGCTTTCAAGTGTACTCACTACAATCAAGGCTGTGCTCGAAGATGCTGAGGAGAAGCAACTCACCAACAAATCTCTCAAAGATTGGCTGCGCAAGCTTCGAGATGCAGCTTACGTGCTGGATGACATCTTGGATGAGTGTTCCACGCATGCCCTTTCCTTAGAGTATCAAGACAAGGTACAAGCCTCTTGCTTATGCTCTTTCAATCCCACTCATGTGAAGTTCCGTTACAAAATTGCCAAGAAATTGAAAGGCATCAGTCAAAGACTTGATGAAATTGCTGAGGAAAGGACGAGGTTTCATTTACGCGAGACGGTTCACGAGAGGAGGAATGAAGTCATGGAATGGCGGCAAACTACCTCAATCATTACTCAAACCCCATTATATGGAAGAGAAGCAGACAAGGAGAAAATTGTGAACTTTTTGGTTGGTGATGCTTCTAATTTGGAGGACGTACCAGTGTATCCAATTATTGGTATTGGCGGTCTCGGAAAAACAACCCTTGCCCAGCACGTCTTCCATGATGAGAGGGTGGTTAATCATTTTGAGCTAAGAATTTGGGTATGTGTCTCTGAAGATTTCAGTTTGAAAAGGATGTCAAAAGCTATAATAGAGTCAGCTACTAGTGGGCATGCTTGTGCAGATTTAGATCTAGAACCGTTACTAAGACGGCTCCAAGAGGTGCTTGGCAGAAAAAAATATTTGCTTGTCTTGGATGACGTGTGGAATGATAATCAGGAGCAATGGGATAAGTTGAAATCCGTTTTGGCTTGTGGATCGAAGGGTGCTTCAATTCTGGTCACCACCCGTCTTAGAAAGGTTGTCTCCATTGCAGGAACAGTGTCTATTCCCTATGAGTTATCACAGTTATCAGAAGATGATTGTTGGGAGTTATTCAGACAACGAGCTTTTGGATCGGAGGAGGAGGAACGTGAAGAGCTTATAACTATAGGGAGGGAGATAGTAAGGAAATGCAACGGAGTTCCACTTGCTGCTAAAACTTTAGGAAGTCTTCTGCGTTTCCAAAGTAATGAAAAAGAGTGGCTCCGTATTAAGGAAAGTGAGATTTGGAATTTGCCACAGGAAGAAGATTCTATCCTGCCTGCTTTAAGATTAAGTTATTTGAATTTATCGGCAAAATTGAGACGGTGTTTTGCCTACCTTGCAGTGTTTCCCAAAGATCAAAGGATGAGTAAAGAACAGGTAATAGCACTTTGGATGGCTAATGGGTTCATTTCAACCAATGAAGAGTTTGAAGTGGAAGATGATGGTGACAGAGTGTGGAATGAATTATATTTAAAGTCATTTTTTGTGGATATTGAGATAGATAAATTTGACTACAGCACATGGTTTAAGATCCATGATCTTCTTCATGATTTAGCACAATCTGTAATGGGGGAAGAATGTTATAGCAGAACATTCGAGAATGGCCCACTTGGTGAAAGAACTCATCACCTCTCACTTGATGACATTGACCAATTTCATAACATATGGTCATCTCATTTGAACAAGGTCAAATCCTTAAAAACATTTATAATGCTAAAGGTTTATGATTATGATGTCAATACTTGTTGTGATAGATTGCTGAAATGTTATCATTTGCGGGCACTTGACCTGATGTTCTTAAGTGAGGTGCCATCTTCTATTGATCAATTAAAACATATGAGGTACTTGAACCTTTCTGGTGGTGAATTTACAATGCTTCCTGATTCGATATGTAGATTGTGGAACTTGCAAATTTTGAATTTGAACGAGTGTGAGTCTCTTGAAAAGCTGCCTAATCAGTTGAAGTGCTTAAAATCTCTCCGTCATCTACATTTGGTAGGGTGTTGGTCATTATCCAGATCGGCCCCTGAGATGCGTCAATTAACTTGCTTGAAGACCTTAAGTGCATATATTGTCGATGTGCAGGAAGGGTTCTTATTGGAAGAAGTAGGAAATTTGAAGCTTGAAGGAACACTCTCCATCAAGCGCTTGGAGAGAGTAACAAGTGAGACGGATGCCAGAAAGGCCAAGTTGGCCGATAAGCGCCTCAACGACTTAGAGTTGTGTTGGAGAAGGAACGAACAATCCCAGTTACAAGAAAATGAGGAGAAAATTCTTGAAGCTCTTCAACCTCACAAGCAACTTAAAAGTTTGGTTGTAGAAGGATATCTTGGCACCCAACTCCCACAATGGATGATTAATCCTACGCTCAAGGATTTAATTTCCTTACGACTCAAGGGTTGTAAAAATCTTGTATGCGTTTCGTGCCTGGCAAAACTTCCGTCTTTGAAGCGTCTGAGCTTGTCGGACATGAATCACATGCAATATATAGATGAGGAATCTTATGTTGATGGGGTTGATAGAGGCTTCCAAGCTCTGGAAGATCTAGAGCTGTTAAGGCTACAGAGCATTGTAAAGTTGTCAAGGGAGGATGGAGACAGCATGTTCCCACGTCTCTCAAAGTTGGACATCACTCATTGTCCGCAACTAAACTTGCCTTTCCTTCCATCCATCACTCAACTAAAAGTTACAAATGGATGTAGCAAGGTGTTAGTTGGTTCAATTCATCAAAATCTGCCCAATCTTGAATGCCTTGCTTTGTCCGGAGATGGAGAGTTGACTTCCTTTCCAGAAGAGATGTTAGTAGGCCTTAAGCACCTTCACGCCAACTTGAAGGCTCTCGTAAAATTGCAAATTGCTCGATGCGACAACTTTGAGACAATAACAGAGGAAGCGTCGCGAGGGTTGTGTTCTCTTAAAAGTCTCTTTATTAGTGGGTGTCCTAAATTCAAACTTTCTGCAGGTTTTGGACACCTCATAGCCCTCAAACTTCTAATTATTAATGAATGCGCGGAGGTGGAAGATATCCATGATGCTTTGCAGCATATTATGACGCTTCGATCGTTATTTTTGTATGATCTCCCAAATTTAGTGTCCTTGCCCGACTGGTTGGGGAACCTTGGGTCGCTTGAGTCATTGCATATATCTCAATGCCCCAAGTTGAGGTCACTTCCGATGAGCACTCAGAGCCTTACAAATTTGGAATATTTGTTCATTTCAAGATGTCCGGAGTTAGGGAAGAGATGCAAGGAGGGAACAGGGGAGGATTGGCACAAAATTGCTCATGTTCCACGTCGTGATATAAGAGATTATTAA 3237 0.4167 MTEAMIDVALDTLSSLIQKELGLFLGVGGEMRRLSSVLTTIKAVLEDAEEKQLTNKSLKDWLRKLRDAAYVLDDILDECSTHALSLEYQDKVQASCLCSFNPTHVKFRYKIAKKLKGISQRLDEIAEERTRFHLRETVHERRNEVMEWRQTTSIITQTPLYGREADKEKIVNFLVGDASNLEDVPVYPIIGIGGLGKTTLAQHVFHDERVVNHFELRIWVCVSEDFSLKRMSKAIIESATSGHACADLDLEPLLRRLQEVLGRKKYLLVLDDVWNDNQEQWDKLKSVLACGSKGASILVTTRLRKVVSIAGTVSIPYELSQLSEDDCWELFRQRAFGSEEEEREELITIGREIVRKCNGVPLAAKTLGSLLRFQSNEKEWLRIKESEIWNLPQEEDSILPALRLSYLNLSAKLRRCFAYLAVFPKDQRMSKEQVIALWMANGFISTNEEFEVEDDGDRVWNELYLKSFFVDIEIDKFDYSTWFKIHDLLHDLAQSVMGEECYSRTFENGPLGERTHHLSLDDIDQFHNIWSSHLNKVKSLKTFIMLKVYDYDVNTCCDRLLKCYHLRALDLMFLSEVPSSIDQLKHMRYLNLSGGEFTMLPDSICRLWNLQILNLNECESLEKLPNQLKCLKSLRHLHLVGCWSLSRSAPEMRQLTCLKTLSAYIVDVQEGFLLEEVGNLKLEGTLSIKRLERVTSETDARKAKLADKRLNDLELCWRRNEQSQLQENEEKILEALQPHKQLKSLVVEGYLGTQLPQWMINPTLKDLISLRLKGCKNLVCVSCLAKLPSLKRLSLSDMNHMQYIDEESYVDGVDRGFQALEDLELLRLQSIVKLSREDGDSMFPRLSKLDITHCPQLNLPFLPSITQLKVTNGCSKVLVGSIHQNLPNLECLALSGDGELTSFPEEMLVGLKHLHANLKALVKLQIARCDNFETITEEASRGLCSLKSLFISGCPKFKLSAGFGHLIALKLLIINECAEVEDIHDALQHIMTLRSLFLYDLPNLVSLPDWLGNLGSLESLHISQCPKLRSLPMSTQSLTNLEYLFISRCPELGKRCKEGTGEDWHKIAHVPRRDIRDY 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4252g00010 1078 PRINTS Disease resistance protein signature 186 201 - -
Pral4252g00010 1078 PRINTS Disease resistance protein signature 785 801 - -
Pral4252g00010 1078 PRINTS Disease resistance protein signature 357 371 - -
Pral4252g00010 1078 PRINTS Disease resistance protein signature 260 274 - -
Pral4252g00010 1078 Gene3D - 145 314 IPR027417 -
Pral4252g00010 1078 SUPERFAMILY L domain-like 484 868 - -
Pral4252g00010 1078 Gene3D - 321 410 IPR042197 -
Pral4252g00010 1078 FunFam Probable disease resistance protein At1g63360 406 495 - -
Pral4252g00010 1078 SUPERFAMILY L domain-like 847 1050 - -
Pral4252g00010 1078 FunFam Probable disease resistance protein At1g61300 141 312 - -
Pral4252g00010 1078 Coils Coil 31 51 - -
Pral4252g00010 1078 Gene3D - 411 495 IPR036388 -
Pral4252g00010 1078 Gene3D Ribonuclease Inhibitor 861 1060 IPR032675 -
Pral4252g00010 1078 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 420 IPR027417 -
Pral4252g00010 1078 CDD RX-CC_like 3 127 IPR038005 -
Pral4252g00010 1078 Gene3D - 5 144 - -
Pral4252g00010 1078 Gene3D Ribonuclease Inhibitor 512 836 IPR032675 -
Pral4252g00010 1078 Pfam NB-ARC domain 164 406 IPR002182 GO:0043531
Pral4252g00010 1078 Pfam Rx N-terminal domain 6 100 IPR041118 -
Pral4252g00010 1078 PANTHER DISEASE RESISTANCE PROTEIN RP 41 853 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4252g00010 Pral-Chr4252 99263 102499 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4252g00010 183 652 WRKY Transcription Factor Family AT5G45050 21.119 1.39e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4252g00010 - - tpra:123906781 1051.97