Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4252g00009 ATGACGGAGGCTATGATTGAGGCTGCACTTGAGACCTTGAGCTCACTCATTCAGAAAGAGCTCGGTTTGTTTCTGGGTGTGCGTGGAGAAATGAGAAGGCTTTCTAGCGTATTCACTACAATCAAGGCTGTGCTCGAAGATGCTGAGGAGAAGCAATTCACCGACAAAGCTCTCAAGAATTGGCTGCGCAAGCTTCGAGATGCAGCTTACTTGCTGGATGACATCTTGGATGAGTGTTCCACGCATGCCCTTTACTTGGAGTGCCAAGACAAGGTACAAGCCTCTTGCTTATGCTCTTTCAACCTCACTTATGTTAAGTTCCGTTACAAAATTGCCAAGAAATTGAAAGGCATCAGTCAAAGACTCGATGAAGTTGCTGAGGAAAGGACGAGGTTTCATTTACGCGAGACGGTTCACGAGAGAAGGAATGAAGTCATGGAATGGCGGCAAAGTACTTCAATCATTACTCAAACCCGATTCTATGGAAGAGAAGCAGACAAGGAGAAAATTGTAGACTTTTTGGTTGGCGATGCTTCTAATTTGGAGGACGTATCAGTGTATCCAATTATTGGTATTGGCGGTCTCGGAAAAACAACCCTTGCCCAGCACGTCTTCCATGATAAGAGGGTAGTTAATCATTTCGAGCTAAGAATTTGGGTATGTGTTTCTGAAGATTTTGGTCTGAAAAGGCTGTCAAAAGCTATAATAGAGTCAGCTACTGGGCATGTTTGTGCAGATTTAGATCTAGAACCCCTACAAAGACGGCTTCAAGAGGTGCTTGGCGGAAAAAGATACTTGCTTGTCCTGGATGACGTGTGGAATGAGAAGCAGGAGGAATGGGATAAGTTGAAATCCGTTTTTGCCTGTGGATCGAAGGGTGCTTCGATTCTGGTCACTACCCGTCTTACAACGGTTGCACGCATTGCAGGAACAGTGTCGCCTCATCAGTTATCACTGCTATCAGAAAATGAGTGTTGGGAGTTGTTCAGACAACGAGCTTTTGGATCGGAGGAGGAGGCACGCGAAGAGCTTATGGCTATAGGGAGGGAAATAGTAAGGAAATGTAAAGGAGTTCCACTTGCTGCTAAAACTTTAGGAAGTCTTCTGCGTTTCCAAAGTAATGAAAAAGAGTGGCTCCGCATTAAGGAAAGTGAGATTTGGAATTTACGACAAGAAGAAGATTCTATACTGCCTGCTTTAAGATTAAGCTATTTGAACTTATCGGCAAAATTGAGACAGTGTTTTGCCTACCTAGCATTGTTTCCCAAAGATCAAAGGATGAGTAAGAAACATGTAATAGAACTTTGGATGGCTAATGGGTTCATTTCAACCAATGGAGGGTTTGAAGAGAAAGGTGATGGTGACAGAGTGTGGAATGAATTATATTTAAGGTCATTTTTTATGGATGTTCATATGGATGAATTTGACTATGACACATGGTTTAAGATCCATGACCTTGTTCATGATTTAGCCCAATCTGTGATGGGGGAAGAATGTTATAGCGGAACATTTGAGAGTGGCCCACTTAGTGAAAGAATTCATCACCTCTCAATTGATGACATTGACAAATTCCGTAACATATGGTCATCTCATTTGAACAAGGTCAAATCCTTAAAAACATTTATAATGCTAAAGGATTATTATTCTACGGCCAACACTTGTTGTGATAGATTGCTGAAATGTTATCATTTGCGGGCACTTGACCTGAGGTTTTTAAATGAGGTGTCATCTTCTATTGACCAATTAAAGCATTTGAGGTACTTGAACCTTTCTAAAGGTGAATTTACAATGCTTCCTGATTCAATATGTACATTGTGGAATTTGCAAATTTTGAATTTGAACCATTGTCGGTTTCTCAAAAAGTTGCCTAACCAATTGAAGTGCTTAAAATCTCTCCGTCATCTACATTTGAATTGGTGTTGGTCATTATCCAGATTGGCCCCTGAGATGCGTCAACTAACTTGTTTGAAGACCTTAAGTGCATATATTGTTGGTGTGCAAGAAGGGTTCTTATTGGAAGAAGTAGGAAATTTGAAGCTTGAAGGAACACTCTCCATCAAGCGCTTGGAGAGAGTAACAAGTGAGACGGATGCTAAAAAGGCCAAGTTGGCTGATAAGCGCCTCAATGACTTAGAGTTGTACTGGAGAAGGAACGAACAATCCCAGTTACAAGAAAATGAGGAGAAAATTCTTGAAGCTCTTCAACCTCACAAGCAACTTAAAAGTTTGGTTGTAGAAGGATATCTTGGCACCCAACTCCCACAATGGATGATTAATCCTACGCTCAAGGATTTAATTTCCTTACGACTCAAGGGTTGTAAAAATCTTGTATGCGTTTCGTGCCTGGCAAAACTTCCGTCTTTGAAGCGTCTGAGCTTGTCGGACATGAATCACGTGCAATACATAGATGAGGAATCTTATGTTGATGGGGTTGATAGAGGCTTCCAAGCTCTGGAAGGTCTAGAGCTGTTAAGGCTACCGAGCATTGTAAAGTTGTCAAGGGAGGATGGAGACAGCATGTTCCCACGTCTCTCAAAGTTGGACATCACTCATTGTCCGCAACTAAACTTGCCTTTCCTTCCATCCATCACTCAACTACAAGTTACAAATGGATGTAGCAAGGAGTTAGTTGGTTCAATTCATCAAAATCTGCCCAATCTTGAATGCCTTGCTTTGTCCGGAGATGGAGAGTTGACTTCCTTTCCAGAAGAGATGTTAGTAGGCCTTAAGCACCTTCACGCCAACTTGAAGGCTCTCGAACAATTGCAAATTAGTGAATGCAACAACCTTGAGACAATTACAGAGGAAGCGTCGCGAGGGTTGTGTTCTCTTAAAAATCTCTTTATTAGTGAGTGTCCTAAATTCAAACTGTCTACAGGTTTTGGACACCTCATAGCCCTTGAAGCTCTAACTATTGATAGATGTGTGGAGGTGAAAGATATCCATGATGCTTTACAGCATATTATGACCCTTCGATTGGTACGATTGTCTGATCTCCCAAATCTATGA 3009 0.4171 MTEAMIEAALETLSSLIQKELGLFLGVRGEMRRLSSVFTTIKAVLEDAEEKQFTDKALKNWLRKLRDAAYLLDDILDECSTHALYLECQDKVQASCLCSFNLTYVKFRYKIAKKLKGISQRLDEVAEERTRFHLRETVHERRNEVMEWRQSTSIITQTRFYGREADKEKIVDFLVGDASNLEDVSVYPIIGIGGLGKTTLAQHVFHDKRVVNHFELRIWVCVSEDFGLKRLSKAIIESATGHVCADLDLEPLQRRLQEVLGGKRYLLVLDDVWNEKQEEWDKLKSVFACGSKGASILVTTRLTTVARIAGTVSPHQLSLLSENECWELFRQRAFGSEEEAREELMAIGREIVRKCKGVPLAAKTLGSLLRFQSNEKEWLRIKESEIWNLRQEEDSILPALRLSYLNLSAKLRQCFAYLALFPKDQRMSKKHVIELWMANGFISTNGGFEEKGDGDRVWNELYLRSFFMDVHMDEFDYDTWFKIHDLVHDLAQSVMGEECYSGTFESGPLSERIHHLSIDDIDKFRNIWSSHLNKVKSLKTFIMLKDYYSTANTCCDRLLKCYHLRALDLRFLNEVSSSIDQLKHLRYLNLSKGEFTMLPDSICTLWNLQILNLNHCRFLKKLPNQLKCLKSLRHLHLNWCWSLSRLAPEMRQLTCLKTLSAYIVGVQEGFLLEEVGNLKLEGTLSIKRLERVTSETDAKKAKLADKRLNDLELYWRRNEQSQLQENEEKILEALQPHKQLKSLVVEGYLGTQLPQWMINPTLKDLISLRLKGCKNLVCVSCLAKLPSLKRLSLSDMNHVQYIDEESYVDGVDRGFQALEGLELLRLPSIVKLSREDGDSMFPRLSKLDITHCPQLNLPFLPSITQLQVTNGCSKELVGSIHQNLPNLECLALSGDGELTSFPEEMLVGLKHLHANLKALEQLQISECNNLETITEEASRGLCSLKNLFISECPKFKLSTGFGHLIALEALTIDRCVEVKDIHDALQHIMTLRLVRLSDLPNL 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4252g00009 1002 FunFam Probable disease resistance protein At1g61300 142 312 - -
Pral4252g00009 1002 Gene3D Ribonuclease Inhibitor 520 857 IPR032675 -
Pral4252g00009 1002 FunFam Probable disease resistance protein At1g63360 404 493 - -
Pral4252g00009 1002 SUPERFAMILY L domain-like 468 913 - -
Pral4252g00009 1002 Pfam NB-ARC domain 164 404 IPR002182 GO:0043531
Pral4252g00009 1002 PANTHER DISEASE RESISTANCE PROTEIN RP 37 851 IPR044974 GO:0006952
Pral4252g00009 1002 CDD RX-CC_like 9 127 IPR038005 -
Pral4252g00009 1002 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 418 IPR027417 -
Pral4252g00009 1002 Gene3D - 141 312 IPR027417 -
Pral4252g00009 1002 Pfam Rx N-terminal domain 6 88 IPR041118 -
Pral4252g00009 1002 PRINTS Disease resistance protein signature 355 369 - -
Pral4252g00009 1002 PRINTS Disease resistance protein signature 259 273 - -
Pral4252g00009 1002 PRINTS Disease resistance protein signature 186 201 - -
Pral4252g00009 1002 PRINTS Disease resistance protein signature 914 930 - -
Pral4252g00009 1002 Gene3D Ribonuclease Inhibitor 858 1002 IPR032675 -
Pral4252g00009 1002 SUPERFAMILY L domain-like 882 997 - -
Pral4252g00009 1002 Gene3D - 398 494 IPR036388 -
Pral4252g00009 1002 Gene3D - 5 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4252g00009 Pral-Chr4252 87004 90012 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4252g00009 183 654 WRKY Transcription Factor Family AT5G45050 23.432 1.15e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4252g00009 - - tpra:123906781 1007.28