Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4252g00008 ATGACGGAGGCTATGATTGAGGTTGCAATTGAGACTTTGAGCTCACTCATTCAGAAAGAGCTCGTTTTGTTTATGGGTGTCGGTGGAGAAATGACAAGGCTTTCAAGCGTACTCACTACAATCAAGGCTGTGCTCGAAGATGCTGAGGAGAAGCAACTCACCGACAAACCTCTCCAGAATTGGCTACGCAAGCTTCGAGATGCAGCTTACTTGCTGGATGACATCTTGGATGAGTGTTCCACGCATGCTCTTTCCTTGGAGTACCAAGACAAGGTACAAGCCTCTTGCTTATGCTCTTTCAATCCCACTCATGTAACGTTCCGTTACAAAATTGCCAAGAAATTGAAAGGCATCAGTCAAAGACTTGATGAGATTGCTGAGGAAAAGTCGAGGTTTCATTTGCGCGAGACGGCTCACGAGAGGAGGAATGAAGTCATGGAATGGCGGCAAACTACCTCAATCATCACTCAACCCCAATTCTATGGAAGAGAAGCAGACAAGGATAAAATTGTGAAATTTTTGACTTTTGATGCTTCTAACTCTGAGGGCGTTTCAGTCTATCCAATTCTTGGTATTGGTGGTCTCGGAAAAACTACTCTTGCACAACGTGTCTTCCATGAGGAGAAGGTAGTTAGTCATTTTGAGCCAAGAATTTGGGTATGTGTTTCTGAGAATTTCAATTTGAAAAGGCTGTCAAAAGATATAATAGAGTCAGTTACTGGGCATCCTTGTGGAGATTTGGGTTTAGAACCATTACAAAGACGGGTCCAAGACCAAGAGGTGCTTGGCAGAAAAAGATATTTGCTTGTCCTGGATGACGTGTGGAATGAGAAGCAGGAGGAATGGGATAAGTTGAAATCCGTTTTGGCCTGTGGATCGAAGGGTGCTTCGATTCTGGTCACTACCCGTCTTACAACGGTTGCACGCATTACAGGAACAGTGTCGCCTCATCAGTTATCACTGCTATCAGAAAATGAGTGTTGGGAGTTGTTCAGACAACGAGCTTTTGGATCGGAGGAGGAGGCACGCGAAGAGCTTATGACTGTAGGGAGGGAGATAGTAAGAAAATGTAAAGGGGTTCCACTAGCTGCTAAAACTCTAGGAAGTCTTCTGCGTTTCCAAAGTAATGAAAAAGAGTGGCTCCGCATTAAGGAAAGTGAGATTTGGAATTTACCACAGGAAGAAGATTCTATCCTGCCTGCTTTCAGATTAAGTTATTTGAATTTATCGGCAAAACTAAGACAGTGTTTTGCCTACCTTGCAGTGTTCCCCAAAGATCAAAGGATGAATAAAGAACATGTAACAGAACTTTGGATGGCTAATGGGTTCATTTCAACCAATGGAGGGTTTGAAGTGGAAGATGATGGTGACAGAGTGTGGAATGAATTATATTTAAAGTCATTTTTTGTGGATGTTGAGATAGATAAATTTGACTACGGCACATGGTTTAAGATCCATGACCTTCTTCATGATTTAGCCCAATCTGTAATGAGGGAAGAATGTTATAGCGGAACATTCGAGAATGGCCCACTTGGTGAAAGGACTCATCACCTCTCACTTGATGACATTGACCAATTTCCTAATATATGGTCATCTCATTTGAACAAGGTCAAATCCTTAAAAACATTTATAATGCTAAGGGATTATTATTCCAAGGTCAACATTTGTCGTGATAGATTGCTAAAATGTTATCATTTGCGGGCACTTGACCTAAGGTTTTCAAATGAGGTGTCATCTTCTATTGACCAATTAAAACATCTGAGGTACTTGAACCTTTCTAATGGTAAATTTACAATGCTTCCTGATCCGATATGTAGATTGTGGAATTTGCAAATTTTGAATTTGAACCGCTGTGTGTCTCTCGAAAAGTTGCCTAATCAGTTGAAATGCTTAAAATCTCTCCGTCATCTACATTTGAAAGGGTGTTGGGCATTATCTAGATTGGCCCCAGAGATGCGTCAACTAACTTGCTTGAAGACCTTAAGTGCATATATTGTCGGTGTGCAGGAGGGGTTCTTATTGGAAGAAGTAGGAAATTTGAAACTTGAAAGAACACTCCACATTAGGCACTTGGAGAGAGTAACAAGTGTGACGGATGCCAGAAAGGCCAACTTGGCCGATAAGCGCCTCAACGAGTTGGAGTTGTGCTGGAGAAGGAATGAACAATCCCATTTACAAGAAAATGAGGAGAAAATTCTCGAAGTTCTTCAACCTCACACGCAACTTAAAAGGTTGGCTGTAGAGGGATATCTTGGTACCCAACTCCCACAATGGATGATCAATCCTACGCTCAAGGATTTAATTTCCTTACGACTCATGGGTTGTAAAAATCTTGCATGCATTTCGTGCCTGGCAAAACTTCCGTCTTTGAAGCGTTTGAGTTTGTGGGGCATGAATGGCGTGCAATATATAGATGAGGAATCTTATGTTGATGGGGTTGACAGAGGTTTCCAAGCTCTGGAAGATCTAGAGCTGGGAATGCTACCAAGCCTTGTAAAGTTGTCAAGGGAGGATGGAGACAACATGCTCCCACGTCTCTCAGAGTTGAGAATCATTGATTGTCCGCAAATAAACTTGCCTTTCCTTCCATCTGTCACTCAACTACGTGTTGAAAGGGGATGTAACAATATGTTACTAGGTTCAATTCAAAATCTGCCCAATCTTGAACGCCTTTATTTGATTGAAGATCAAGAGTTGACTTCCTTTGCAGATGAGATGTTAGAAGGCCTTGAGCAACTCAAAGAACTCGCATTTCGCCTGCTTCGCAAACTTGAAGTTCTCCCAACTGGACTCACCAACTTGAAGGCTCTCGAACGATTGGAAATTAGTGTATGCGACAACCTGGAGACAATAAGAGAGGAAGCGATGCAAGGGTTGTGTTCTCTTAAATATCTCTATGTTGGTGGGTGTCCTAAATTCAAACTGTCTGCAGGTTTTGGACACCTCATAGCCCTTGAACGTCTAACTATTTGTGGATCCGCAGAGGTGGAAGATATCCATGATGCCTTACAGCATATTATGACCCTTCGATTTTTATATTTGTATGATCTCCCAAATCTAACGTCCTTGCCTGACTGGTTGGGGAACCTTGGGTCGCTTGAGTCATTGTGGATATCTGAGTGCCCCAAGTTGACGTCACTTCCGATGAGCACTCAGAGCCTTACAAATTTGAAAGATTTGACAATTGACGGTTGTCCGGAGTGA 3204 0.4238 MTEAMIEVAIETLSSLIQKELVLFMGVGGEMTRLSSVLTTIKAVLEDAEEKQLTDKPLQNWLRKLRDAAYLLDDILDECSTHALSLEYQDKVQASCLCSFNPTHVTFRYKIAKKLKGISQRLDEIAEEKSRFHLRETAHERRNEVMEWRQTTSIITQPQFYGREADKDKIVKFLTFDASNSEGVSVYPILGIGGLGKTTLAQRVFHEEKVVSHFEPRIWVCVSENFNLKRLSKDIIESVTGHPCGDLGLEPLQRRVQDQEVLGRKRYLLVLDDVWNEKQEEWDKLKSVLACGSKGASILVTTRLTTVARITGTVSPHQLSLLSENECWELFRQRAFGSEEEAREELMTVGREIVRKCKGVPLAAKTLGSLLRFQSNEKEWLRIKESEIWNLPQEEDSILPAFRLSYLNLSAKLRQCFAYLAVFPKDQRMNKEHVTELWMANGFISTNGGFEVEDDGDRVWNELYLKSFFVDVEIDKFDYGTWFKIHDLLHDLAQSVMREECYSGTFENGPLGERTHHLSLDDIDQFPNIWSSHLNKVKSLKTFIMLRDYYSKVNICRDRLLKCYHLRALDLRFSNEVSSSIDQLKHLRYLNLSNGKFTMLPDPICRLWNLQILNLNRCVSLEKLPNQLKCLKSLRHLHLKGCWALSRLAPEMRQLTCLKTLSAYIVGVQEGFLLEEVGNLKLERTLHIRHLERVTSVTDARKANLADKRLNELELCWRRNEQSHLQENEEKILEVLQPHTQLKRLAVEGYLGTQLPQWMINPTLKDLISLRLMGCKNLACISCLAKLPSLKRLSLWGMNGVQYIDEESYVDGVDRGFQALEDLELGMLPSLVKLSREDGDNMLPRLSELRIIDCPQINLPFLPSVTQLRVERGCNNMLLGSIQNLPNLERLYLIEDQELTSFADEMLEGLEQLKELAFRLLRKLEVLPTGLTNLKALERLEISVCDNLETIREEAMQGLCSLKYLYVGGCPKFKLSAGFGHLIALERLTICGSAEVEDIHDALQHIMTLRFLYLYDLPNLTSLPDWLGNLGSLESLWISECPKLTSLPMSTQSLTNLKDLTIDGCPE 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4252g00008 1067 SUPERFAMILY RNI-like 878 1066 - -
Pral4252g00008 1067 Pfam Rx N-terminal domain 6 90 IPR041118 -
Pral4252g00008 1067 SUPERFAMILY L domain-like 484 869 - -
Pral4252g00008 1067 Pfam NB-ARC domain 164 385 IPR002182 GO:0043531
Pral4252g00008 1067 Gene3D - 411 495 IPR036388 -
Pral4252g00008 1067 Gene3D - 321 410 IPR042197 -
Pral4252g00008 1067 FunFam Probable disease resistance protein At1g63360 406 495 - -
Pral4252g00008 1067 Gene3D Ribonuclease Inhibitor 514 668 IPR032675 -
Pral4252g00008 1067 Gene3D Ribonuclease Inhibitor 669 869 IPR032675 -
Pral4252g00008 1067 Gene3D - 141 314 IPR027417 -
Pral4252g00008 1067 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 420 IPR027417 -
Pral4252g00008 1067 Gene3D Ribonuclease Inhibitor 873 1066 IPR032675 -
Pral4252g00008 1067 Gene3D - 5 126 - -
Pral4252g00008 1067 PRINTS Disease resistance protein signature 357 371 - -
Pral4252g00008 1067 PRINTS Disease resistance protein signature 261 275 - -
Pral4252g00008 1067 PRINTS Disease resistance protein signature 932 948 - -
Pral4252g00008 1067 PRINTS Disease resistance protein signature 186 201 - -
Pral4252g00008 1067 CDD RX-CC_like 3 127 IPR038005 -
Pral4252g00008 1067 PANTHER DISEASE RESISTANCE PROTEIN RP 40 854 IPR044974 GO:0006952
Pral4252g00008 1067 FunFam Probable disease resistance protein At1g61300 142 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4252g00008 Pral-Chr4252 78997 82246 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4252g00008 189 652 WRKY Transcription Factor Family AT5G45050 23.800 9.87e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4252g00008 - - mtr:11425422 1078.54