Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4252g00002 ATGCCGACGGACAGATCAAAATCAGAGAAGCGCGACGCTGCGAAGCAGCTCCGGCGGGACCCTCGTGAGGTTCTCGGCGTCTCACGAAACTCCACAGATCAAGACATTAAAACTGCTTACCGGAAACTGGCACTCAAATATCATCCTGACAAGAATGCTAATGATCCTAAAGCAGCGGATTTGTTCAAAGAGGCCACCTTTGCATATAATATCTTGTCAGATCCTGAAAAACGCCATCAGTATGACTCTTATGGTCTTGAGGCTGTTGAATCAGATAACCAAGATTTGGAGTTGGATCTTTCGAGTTTAGGTGCTGTGAATACAATATTTGCAGCACTTTTTAGTAAACTTGGTGTGCCAATTAAGACAACTGTATCGGCGACTGTTTTGGAAGAAGCGCTTAATGGGGCAGTGATCATTCATTCGCTTCCACTGGGGCTGCCTATATCTAAAAGGGTTGAGAAGCAATGTGCTCACTTTTATTCAGTTACATTATCAGAAGAACAAGCACAGGATGGATTGGTTTGCCGTGTGCAATCATCAGACAAGAGCAAGTTCAAGTTACTATATTTTGATCAAGAAGAGGCTGGTGGACTAAGTCTTGCACTCCAGGAAGACAGTGCAAAAACAGGGAAGGTAACCTCTGCGGGAATGTATTTTCTTGGCTTTCCCGTTTATCAATTGGATCAGACCATGAATTCAACAGCTGCTGCTAAGGATCCTGATGCATCATTTTTCAGAAAGCTAGATGGGTTCCGCCCATGTGAACTAACAGAACTGAAGGCTGGTACTCATGTATTTGCCGTTTATGGTGACAATTTTTTCAAAAGTGCAAGCTACACTATAGAAGCTTCATGTGCTGCGCCTTTTAGTCAAGAGAAAGAAAGTCTCAAAAGTGTAGAAGCCCAAATTTTATCTAAAAGGGCGGACCTAACGAAGTTTGAGTCCGAATACCGAGAGGTCCTGGCAGAATTTACAGAGATGACAAGTAGATATACACAAGAAATGCAAGCGATTGATGAGCTACTTAAGCAGAGGAATGAAATACGTTCATCATATACTGTCGCTCCATTAAAACGAAGTACGACGAAGAGGAGTAAAAGTTCTTCCAAGGAGGAGCGAGAAGATGGCCAAGCAAGAGAGAAGAGATATACAAGGGAACGACGGAGGAGGAAGAAATGGTATAACATCCACTTAAAAGCTGATAAGAGAAAAGCTTGCTAG 1224 0.4297 MPTDRSKSEKRDAAKQLRRDPREVLGVSRNSTDQDIKTAYRKLALKYHPDKNANDPKAADLFKEATFAYNILSDPEKRHQYDSYGLEAVESDNQDLELDLSSLGAVNTIFAALFSKLGVPIKTTVSATVLEEALNGAVIIHSLPLGLPISKRVEKQCAHFYSVTLSEEQAQDGLVCRVQSSDKSKFKLLYFDQEEAGGLSLALQEDSAKTGKVTSAGMYFLGFPVYQLDQTMNSTAAAKDPDASFFRKLDGFRPCELTELKAGTHVFAVYGDNFFKSASYTIEASCAAPFSQEKESLKSVEAQILSKRADLTKFESEYREVLAEFTEMTSRYTQEMQAIDELLKQRNEIRSSYTVAPLKRSTTKRSKSSSKEEREDGQAREKRYTRERRRRKKWYNIHLKADKRKAC 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4252g00002 407 PRINTS DnaJ domain signature 77 96 IPR001623 -
Pral4252g00002 407 PRINTS DnaJ domain signature 57 77 IPR001623 -
Pral4252g00002 407 PRINTS DnaJ domain signature 22 40 IPR001623 -
Pral4252g00002 407 PRINTS DnaJ domain signature 40 55 IPR001623 -
Pral4252g00002 407 MobiDBLite consensus disorder prediction 354 387 - -
Pral4252g00002 407 Gene3D DnaJ domain 4 103 IPR036869 -
Pral4252g00002 407 ProSitePatterns Nt-dnaJ domain signature. 62 81 IPR018253 -
Pral4252g00002 407 SMART dnaj_3 19 77 IPR001623 -
Pral4252g00002 407 FunFam Chaperone protein dnaJ 16 4 102 - -
Pral4252g00002 407 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 5 406 - -
Pral4252g00002 407 MobiDBLite consensus disorder prediction 1 26 - -
Pral4252g00002 407 CDD DnaJ 20 74 IPR001623 -
Pral4252g00002 407 MobiDBLite consensus disorder prediction 1 31 - -
Pral4252g00002 407 Pfam DnaJ domain 23 82 IPR001623 -
Pral4252g00002 407 SUPERFAMILY Chaperone J-domain 19 89 IPR036869 -
Pral4252g00002 407 ProSiteProfiles dnaJ domain profile. 20 85 IPR001623 -
Pral4252g00002 407 MobiDBLite consensus disorder prediction 365 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4252g00002 Pral-Chr4252 25328 28635 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4252g00002 23 84 C2H2 Transcription Factor Family AT1G74250 43.284 3.87e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4252g00002 - - gmx:100800929 644.039