Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4250g00037 ATGGAGGTCTGTGATCTCTTGCCGCCGGATTCCGAAGAGGTTCATGTCTTGGCTGTCGATGACAGCCTCGTCGATCGGAAAGTCATCGAGCGCTTGCTCAGGATTTCAGCTTGTAAAGTCACTGCTGTCGACAGTGGAATAAGAGCCCTGCAATTCCTTGGACTTGACAACCAGAAATCTCCTTCCGAATCGGACGGCTTTGATGTGAGGAATCAATTTTCATTCCTTGATTTTATTTTAATTTCCTCGAAAAGTTTATTTTTCTTGAAACGGAAAACTAATTCCATGCTTGCTCAGGGTTTAAAGGTGGATCTAATCATCACTGACTACTGCATGCCTGGAATGACCGGCTATGAATTACTCAAGAAAATCAAGGAATCTTCCACCTTCAAAGAAATTCCAGTGGTGATCATGTCCTCTGAAAACGTTTTGCCCCGAATAGACAGGTGTTTGGAAGAAGGGGCAGAGGATTTCATAGTGAAGCCGGTGAAGTTATCAGACGTGAAGCGGTTAAGGGATTACATGACGACAAGAGAAGTTAAGGCGGGAAGTCAGGAGAGAGAGGGCGGCGTCAGGTTCACCAAAAGAAAGCTGACAGAACCCGCTGATCTGGATTCATCGCCGCCGTCCGTAACCTCGTCATCTGTACTGTCATCGTCCCCGTCGTCACCGTTGGATTCGGCTTCTCCGACGCCGTCGCCGTCGGTCTCCCCTCCCCCTTCACCTTCCCCGCTCGATTCTCCAGTCACGCGGCTTAGAATGACCACCACCACCAGCGCCGATTGA 786 0.4924 MEVCDLLPPDSEEVHVLAVDDSLVDRKVIERLLRISACKVTAVDSGIRALQFLGLDNQKSPSESDGFDVRNQFSFLDFILISSKSLFFLKRKTNSMLAQGLKVDLIITDYCMPGMTGYELLKKIKESSTFKEIPVVIMSSENVLPRIDRCLEEGAEDFIVKPVKLSDVKRLRDYMTTREVKAGSQEREGGVRFTKRKLTEPADLDSSPPSVTSSSVLSSSPSSPLDSASPTPSPSVSPPPSPSPLDSPVTRLRMTTTTSAD 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4250g00037 261 SMART REC_2 14 172 IPR001789 GO:0000160
Pral4250g00037 261 SUPERFAMILY CheY-like 14 171 IPR011006 -
Pral4250g00037 261 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 207 IPR045279 GO:0009736
Pral4250g00037 261 ProSiteProfiles Response regulatory domain profile. 15 176 IPR001789 GO:0000160
Pral4250g00037 261 MobiDBLite consensus disorder prediction 205 226 - -
Pral4250g00037 261 CDD REC_typeA_ARR 16 171 - -
Pral4250g00037 261 Pfam Response regulator receiver domain 98 168 IPR001789 GO:0000160
Pral4250g00037 261 MobiDBLite consensus disorder prediction 180 261 - -
Pral4250g00037 261 Gene3D - 14 219 - -
Pral4250g00037 261 MobiDBLite consensus disorder prediction 180 202 - -
Pral4250g00037 261 MobiDBLite consensus disorder prediction 227 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4250g00037 Pral-Chr4250 283212 284560 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4250g00037 8 249 Response Regulator Gene Family AT1G59940 55.738 1.81e-73 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral4250g00037 Response_reg 6e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4250g00037 K14492 - tcc:18609348 250.366