Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4250g00036 ATGGAGGTCTGTGATCTCTTGCCGCCGGATTCCGAAGAGGTTCATGTCTTGGCTGTCGATGACAGCCTCGTCGATCGGAAAGTCATCGAGCGCTTGCTCAGGATTTCAGCTTGTAAAGTCACTGCTGTCGACAGTGGAATAAGAGCCCTGCAATTCCTTGGACTTGACAACCAGAAATCTCCTTCCGAATCGGACGGCTTTGATGGTTTAAAGGTGGATCTAATCATCACTGACTACTGCATGCCTGGAATGACCGGCTATGAATTACTCAAGAAAATCAAGGAATCTTCCACCTTCAAAGAAATTCCAGTGGTGATCATGTCCTCTGAAAACGTTTTGCCCCGAATAGACAGGTGTTTGGAAGAAGGGGCAGAGGATTTCATAGTGAAGCCGGTGAAGTTATCAGACGTGAAGCGGTTAAGGGATTACATGACGACAAGAGAAGTTAAGGCGGGAAGTCAGGAGAGAGAGGGCGGCGTCAGGTTCACCAAAAGAAAGCTGACAGAACCCGCTGATCTGGATTCATCGCCGCCGTCCGTAACCTCGTCATCTGTACTGTCATCGTCCCCGTCGTCACCGTTGGATTCGGCTTCTCCGACGCCGTCGCCGTCGGTCTCCCCTCCCCCTTCACCTTCCCCGCTCGATTCTCCAGTCACGCGGCTTAGAATGACCACCACCACCAGCGCCGATTGA 693 0.518 MEVCDLLPPDSEEVHVLAVDDSLVDRKVIERLLRISACKVTAVDSGIRALQFLGLDNQKSPSESDGFDGLKVDLIITDYCMPGMTGYELLKKIKESSTFKEIPVVIMSSENVLPRIDRCLEEGAEDFIVKPVKLSDVKRLRDYMTTREVKAGSQEREGGVRFTKRKLTEPADLDSSPPSVTSSSVLSSSPSSPLDSASPTPSPSVSPPPSPSPLDSPVTRLRMTTTTSAD 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4250g00036 230 MobiDBLite consensus disorder prediction 174 195 - -
Pral4250g00036 230 SUPERFAMILY CheY-like 14 140 IPR011006 -
Pral4250g00036 230 Gene3D - 14 188 - -
Pral4250g00036 230 MobiDBLite consensus disorder prediction 148 230 - -
Pral4250g00036 230 MobiDBLite consensus disorder prediction 148 171 - -
Pral4250g00036 230 SMART REC_2 14 141 IPR001789 GO:0000160
Pral4250g00036 230 MobiDBLite consensus disorder prediction 196 215 - -
Pral4250g00036 230 ProSiteProfiles Response regulatory domain profile. 15 145 IPR001789 GO:0000160
Pral4250g00036 230 CDD REC_typeA_ARR 16 140 - -
Pral4250g00036 230 Pfam Response regulator receiver domain 16 137 IPR001789 GO:0000160
Pral4250g00036 230 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 179 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4250g00036 Pral-Chr4250 283212 284560 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4250g00036 8 218 Response Regulator Gene Family AT1G59940 64.486 5.55e-80 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral4250g00036 Response_reg 2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4250g00036 K14492 - tcc:18609348 266.544