Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4250g00027 ATGATGCCTCGCACGTGCTCACAGTGTGGCACCACCGGCCACAACTCCCGAACATGCTCCGACGGCAGCAACGGCGCCTGCGAGAATAGTATCTTACTGTTCGGGGTGCGAGTCACGCAAGGGAACTGTTTCAAGAAGAGCGCTAGCATGACGGATCTACAACAGTACGAGCAGTCGCTGCCTCAGGATTCCAACGCCGACGCCGGTTACGCCTCCGATGATGTCGTTCACGCTTCCGGTCGTAGCCGCGAGCGAAAGAGAGGCGTGCCATGGACGGAAGAGGAGCATAGGCTATTCCTGGTGGGGCTTCAACAGGTGGGGAAAGGTGATTGGAGAGGGATTTCTAGAAACTTCGTGAAAACTCGTACACCAACTCAGGTAGCCAGTCATGCTCAGAAGTACTTCCTCCGTCGCCATAACCAGAACCGGAGACGCCGGAGATCTAGTCTGTTTGATATCACCACCGATACGGTGATGGAATCCTCAGCGACAGCAGAAGAAGGGAGAGTCCACCAAGAATCAGTACCGCCGAAATATCCCCATTACGGTGGCATTGGCGGTTCTGCTTTTCAGATGACGCTGTCCCCGCCGATGAAACCTATGGGAGCTAAGCTGATAAGGCCTACGCCGATCCTGCCAGTTGCTCCGTCGCCGAAAATGGCAAATTTAAACTTGAGGGAGGAAGGTCACGTGGCCGACACTCTGCCGGCGAGCAAGGAGAAGCCGTCGTTGGCTTTCGAGGTGATGTCAGGAAAGCTGAGCGGTGCCGGCGACAGCAATAGCATGATCAGTGTTGCTTGA 801 0.5543 MMPRTCSQCGTTGHNSRTCSDGSNGACENSILLFGVRVTQGNCFKKSASMTDLQQYEQSLPQDSNADAGYASDDVVHASGRSRERKRGVPWTEEEHRLFLVGLQQVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTDTVMESSATAEEGRVHQESVPPKYPHYGGIGGSAFQMTLSPPMKPMGAKLIRPTPILPVAPSPKMANLNLREEGHVADTLPASKEKPSLAFEVMSGKLSGAGDSNSMISVA 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4250g00027 266 SMART sant 87 137 IPR001005 -
Pral4250g00027 266 Gene3D - 89 140 - -
Pral4250g00027 266 ProSiteProfiles Myb-like domain profile. 83 135 IPR001005 -
Pral4250g00027 266 CDD SANT 90 135 IPR001005 -
Pral4250g00027 266 NCBIfam myb-like DNA-binding domain, SHAQKYF class 86 137 IPR006447 GO:0003677
Pral4250g00027 266 ProSiteProfiles Zinc finger CCHC-type profile. 6 19 IPR001878 GO:0003676|GO:0008270
Pral4250g00027 266 MobiDBLite consensus disorder prediction 1 21 - -
Pral4250g00027 266 SUPERFAMILY Homeodomain-like 85 138 IPR009057 -
Pral4250g00027 266 FunFam transcription factor MYB1R1 89 140 - -
Pral4250g00027 266 ProSiteProfiles SANT domain profile. 86 139 IPR017884 -
Pral4250g00027 266 PANTHER TRANSCRIPTION FACTOR KUA1 3 192 - -
Pral4250g00027 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 139 IPR017930 -
Pral4250g00027 266 MobiDBLite consensus disorder prediction 58 88 - -
Pral4250g00027 266 Pfam Myb-like DNA-binding domain 90 135 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4250g00027 Pral-Chr4250 183264 185100 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4250g00027 Myb_DNA-binding 7.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4250g00027 - - cave:132178782 302.367