Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4250g00008 ATGTCGAAGGGAGAGGAAGCAGTGAAGGTTCTGGGTGTATGGTACAGCCCGTTTGTGATGAGGGTTCGCATTTCTCTGAATATTAAGTCAGTCAAGTATAATTTCCTTGAAGAGAATCTGGGAGACAAGAGCCAGCTTCTGCTTCAGTCCAATCCTGTTCACAAGAAAGTCCCTGTCCTTATCCATGAAGATAAGCCTGTTTGTGAGTCTCTCATCATTGTTGAGCACGTCGACCAAGTCTGGTCTTCTGCTCCTTCTATTCTTCCCTCTCATCCTCATGATCGTGCCATTGCTCGTTTCTGGGCTGCCTATATTGACCACAAGTGGTACCCAGCCTTCAAAGGCATTGCTGGAGCGAAGGGAGAGAAAGAGATAAAGGTTCTGATGCGGGAAGTGGATGAAGGACTAGCTTTGCTAGAGGATGCATACAACAATATCAGCAAAGGCAAGCCCTTCTTCGGCGGCGACCGTATTGGGTACCTTGATATTGCATTTGGCTGCTTCTTGGGGTGGATAAGGGTGACGGAGACGGTCACCGGCGCGGAGTTGATCAGCGAGGCCAAGACGCCGGGCCTGGCGAAATGGTCTAAAAAGTTTTGGGAAGATGACGCGGTGAGACCTGTTATGCCAGAGACTAGGGGTGTTCAATTTGTCCCTTTAAAGGATAGAGACTACATTATAGAGTTCAGATACCGATGGTTCCATTACTGCATGGAAATTAGAAGATGA 729 0.4801 MSKGEEAVKVLGVWYSPFVMRVRISLNIKSVKYNFLEENLGDKSQLLLQSNPVHKKVPVLIHEDKPVCESLIIVEHVDQVWSSAPSILPSHPHDRAIARFWAAYIDHKWYPAFKGIAGAKGEKEIKVLMREVDEGLALLEDAYNNISKGKPFFGGDRIGYLDIAFGCFLGWIRVTETVTGAELISEAKTPGLAKWSKKFWEDDAVRPVMPETRGVQFVPLKDRDYIIEFRYRWFHYCMEIRR 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4250g00008 242 CDD GST_N_Tau 8 81 - -
Pral4250g00008 242 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Pral4250g00008 242 SFLD Main.3: Omega- and Tau-like 5 213 IPR045073 -
Pral4250g00008 242 Pfam Glutathione S-transferase, C-terminal domain 100 200 IPR004046 -
Pral4250g00008 242 SUPERFAMILY Thioredoxin-like 8 110 IPR036249 -
Pral4250g00008 242 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Pral4250g00008 242 FunFam Glutathione S-transferase GSTU6 3 88 - -
Pral4250g00008 242 Gene3D - 88 223 - -
Pral4250g00008 242 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 225 IPR010987 -
Pral4250g00008 242 Gene3D Glutaredoxin 1 87 - -
Pral4250g00008 242 SUPERFAMILY GST C-terminal domain-like 80 212 IPR036282 -
Pral4250g00008 242 CDD GST_C_Tau 92 212 IPR045074 GO:0004364|GO:0006749
Pral4250g00008 242 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 211 IPR045073 -
Pral4250g00008 242 FunFam Glutathione S-transferase U9 88 223 - -
Pral4250g00008 242 SFLD Main (cytGST) 5 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4250g00008 Pral-Chr4250 60238 63820 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4250g00008 8 212 Glutathione S-transferase Gene Family AT1G10370 62.621 2.00e-94 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4250g00008 K00799 - pvy:116117334 303.908