Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4250g00007 ATGCCGAAGGGAGAGGAAGCAGTGAAGGTTCTGGGTGTATGGGCGAGTCCGTTTGTGATGAGGGCTCGCATTGCTCTGAATATGAAGTCAGTCAAGTATGAGTTCCTTCAAGAGAATCTGGGATCCAAGAGCCAGCTTCTGCTTCAGTCCAATCCTGTTCACAAGAAAGTCCCTGTTCTGATCCATGAACATAAGCCTGTATGCGAGTCTCTCATTATTGTTGAGTACGTCGACCAAGTCTTCTCTTCTGGTCCTTCTATTCTTCCTTCTGATCCCTACGATCGCGCCATTGCTCGTTTCTGGGCTGCCTATCTCGACGACAAGTGGTACCCCACCCTCAAAGCCATGGCTGGAGCAAAAGGGGAGAAAGAGATAAAGGTTGTGATACAGCAGGTGGAAGAAGGGTTGGCGTTGCTGGAGGATGCATACAACAAGATCAGCAAAGGCAAGCCCTTCTTCGCCGGCGACCGTATCGGATACCTCGATATTGCATTTGGCTGCTTCTTGGGGTGGACGAGGGTGACGGAGACGGTCACGGGCACCGCGTTGATCGACGAGTTCAAGACGCCGGGGCTGGCCAAATGGGCTGAAAAGTTTTGTGAAGATGATGCTGTGAAACCTGTTATGCCCGAGACGAAGAAGCTTGTTGAGTTCTTCCATGTTATTCGTGCAAAATTTGGCGGTTCTGCTTGA 693 0.5065 MPKGEEAVKVLGVWASPFVMRARIALNMKSVKYEFLQENLGSKSQLLLQSNPVHKKVPVLIHEHKPVCESLIIVEYVDQVFSSGPSILPSDPYDRAIARFWAAYLDDKWYPTLKAMAGAKGEKEIKVVIQQVEEGLALLEDAYNKISKGKPFFAGDRIGYLDIAFGCFLGWTRVTETVTGTALIDEFKTPGLAKWAEKFCEDDAVKPVMPETKKLVEFFHVIRAKFGGSA 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4250g00007 230 CDD GST_N_Tau 8 81 - -
Pral4250g00007 230 SUPERFAMILY Thioredoxin-like 8 111 IPR036249 -
Pral4250g00007 230 SUPERFAMILY GST C-terminal domain-like 83 225 IPR036282 -
Pral4250g00007 230 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 218 IPR010987 -
Pral4250g00007 230 Pfam Glutathione S-transferase, C-terminal domain 100 201 IPR004046 -
Pral4250g00007 230 Gene3D - 88 228 - -
Pral4250g00007 230 FunFam Glutathione S-transferase GSTU6 3 88 - -
Pral4250g00007 230 Gene3D Glutaredoxin 1 87 - -
Pral4250g00007 230 SFLD Main.3: Omega- and Tau-like 5 227 IPR045073 -
Pral4250g00007 230 CDD GST_C_Tau 92 219 IPR045074 GO:0004364|GO:0006749
Pral4250g00007 230 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 217 IPR045073 -
Pral4250g00007 230 SFLD Main (cytGST) 5 227 - -
Pral4250g00007 230 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Pral4250g00007 230 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Pral4250g00007 230 FunFam Glutathione S-transferase U9 88 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4250g00007 Pral-Chr4250 58177 59884 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4250g00007 8 218 Glutathione S-transferase Gene Family AT1G10370 68.868 1.55e-105 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4250g00007 K00799 - pvy:116117334 329.331