Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4250g00006 ATGTCGGAGGGAGAGAAAGTAGTGAAGCTTCTGGGTGCATGGCCGAGTCCCTTTGTGATGAGGCCTCGCATAGCTCTGAATATTAAGTCTGCGAGTTATGAGTTTCTTGAAGAGACTTTGGGATCCAAGAGCCAGCTTCTGCTTCAGTCCAATCCTGTTCATAAGAAAATCCCAGTTCTGATTCATGGAGATAAGCCTGTGTGCGAGTCTCTCATTATTGTTGAGTACGTCGACCAAGTCTTCTCTTCTGGTCCTTCTATTCTTCCTTCTGATCCCTACGATCGTTCCGTTGCTCGTTTCTGGGCTGCCTATCTTGACGACAAGTGGTTCCCTGCGATGAAAGCTATTGCTGGTGCAAAAGGGGACGAAGAGGGGAAGGCTCTGATACAGCAATTAGGGGAAGGATTAGCGTTAATGGAGAGCGCCTATCACAACATTAGCAAAGGCAAGCCCTTCTTTGGTGGTGACCGGGTCGGGTATCTGGATATTGCATTCGGCTGCTTCCTTGGGTGGCTGAGGGTAACCGAGTCGCATATTGGGCTCAAGTTGTTGGACCAAACCAAGACACCGGGCCTCGCCCAATGGGCCGAAACATTCTGTGCGGATGATGCCGTTAAGCCTGTCATGCCTGAAACGGACAAGCTTAGCGAGTTCGCCAAGTTACTTATGGCTAAAACGGCATCAAACTAG 690 0.4971 MSEGEKVVKLLGAWPSPFVMRPRIALNIKSASYEFLEETLGSKSQLLLQSNPVHKKIPVLIHGDKPVCESLIIVEYVDQVFSSGPSILPSDPYDRSVARFWAAYLDDKWFPAMKAIAGAKGDEEGKALIQQLGEGLALMESAYHNISKGKPFFGGDRVGYLDIAFGCFLGWLRVTESHIGLKLLDQTKTPGLAQWAETFCADDAVKPVMPETDKLSEFAKLLMAKTASN 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4250g00006 229 SFLD Main.3: Omega- and Tau-like 5 227 IPR045073 -
Pral4250g00006 229 Gene3D Glutaredoxin 1 87 - -
Pral4250g00006 229 SUPERFAMILY GST C-terminal domain-like 83 224 IPR036282 -
Pral4250g00006 229 CDD GST_N_Tau 8 81 - -
Pral4250g00006 229 FunFam Glutathione S-transferase GSTU6 3 88 - -
Pral4250g00006 229 Gene3D - 88 229 - -
Pral4250g00006 229 FunFam Glutathione S-transferase U9 88 229 - -
Pral4250g00006 229 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Pral4250g00006 229 Pfam Glutathione S-transferase, C-terminal domain 100 202 IPR004046 -
Pral4250g00006 229 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Pral4250g00006 229 SUPERFAMILY Thioredoxin-like 8 110 IPR036249 -
Pral4250g00006 229 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 216 IPR045073 -
Pral4250g00006 229 SFLD Main (cytGST) 5 227 - -
Pral4250g00006 229 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 222 IPR010987 -
Pral4250g00006 229 CDD GST_C_Tau 92 222 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4250g00006 Pral-Chr4250 52097 53627 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4250g00006 8 225 Glutathione S-transferase Gene Family AT1G10370 68.950 1.32e-111 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4250g00006 K00799 - pvy:116117334 347.436