Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4250g00005 ATGGCAAACACTAACCTCAAGCTTCTGAGTGGATGGTTCAGTCCATTCGTTTTGAGGGTTAAGATTGCCCTCAACATCAAATCTCTGGAATATGAAAACATTGAAGAGACCTGGAACCCAAAAAGCCGGCTTCTTCTCCAGTCAAATCCTGTTCAGCAGAAAATCCCGGTCCTCCTTCACGGAGACAAACCCATCTGTGAATCTAGAATCATCGTCGAATACATAGACGAGGTTTGGAACTCCGGTCCCTCCATCCTACCTGCAGATGCTTACGATCGAGCCATGGCTCGTTTCTGGGCTGCCTACATCGATGACAAGTGTTCTGCGGCCATGAGAAATGTTCTCGGTGAAGAAGACGAAGAAGCAAGGAAGTCATACTTGGAGGAAGTAGAAGATGTGCTTGTGACAATGGAAGGTGAGTTGCAGAAATGTTGCAGAGAAGAAGGAAAGGGATTTTTTGGAGGAGAAGAAATTGGGTTGGTTGATATTACTTTTGGAAGCTTGCTGCGTTGGTTGAGTGCGATAGAGACTATGAATGGAAGAAAGTTGATGGTTGAAGCGAAGCATCCTGGTTTGGTGAAATGGGCAGAGAGATTCGGGTCTGATCCTAACGTGAAGGGGTTGATGCCTGAAACTGAGAAACTCATTGAATATGTAAAGGTTCTTCAGATAAGATGGAAAGCTGCCGCGGCTTCTGCAAAGTAA 705 0.4553 MANTNLKLLSGWFSPFVLRVKIALNIKSLEYENIEETWNPKSRLLLQSNPVQQKIPVLLHGDKPICESRIIVEYIDEVWNSGPSILPADAYDRAMARFWAAYIDDKCSAAMRNVLGEEDEEARKSYLEEVEDVLVTMEGELQKCCREEGKGFFGGEEIGLVDITFGSLLRWLSAIETMNGRKLMVEAKHPGLVKWAERFGSDPNVKGLMPETEKLIEYVKVLQIRWKAAAASAK 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4250g00005 234 Gene3D - 86 231 - -
Pral4250g00005 234 Pfam Glutathione S-transferase, C-terminal domain 93 201 IPR004046 -
Pral4250g00005 234 FunFam Glutathione S-transferase U9 86 229 - -
Pral4250g00005 234 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 216 IPR045073 -
Pral4250g00005 234 CDD GST_C_Tau 90 222 IPR045074 GO:0004364|GO:0006749
Pral4250g00005 234 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Pral4250g00005 234 SFLD Main.3: Omega- and Tau-like 2 230 IPR045073 -
Pral4250g00005 234 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Pral4250g00005 234 SUPERFAMILY GST C-terminal domain-like 77 222 IPR036282 -
Pral4250g00005 234 Coils Coil 127 147 - -
Pral4250g00005 234 CDD GST_N_Tau 6 79 - -
Pral4250g00005 234 Gene3D Glutaredoxin 1 85 - -
Pral4250g00005 234 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Pral4250g00005 234 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 222 IPR010987 -
Pral4250g00005 234 SFLD Main (cytGST) 2 230 - -
Pral4250g00005 234 FunFam Glutathione S-transferase GSTU6 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4250g00005 Pral-Chr4250 38006 39091 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4250g00005 1 220 Glutathione S-transferase Gene Family AT1G10370 53.394 2.29e-79 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4250g00005 K00799 - qsa:O6P43_025389 291.582