Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4250g00004 ATGGTAAACACTGGCCTCAAGCTTCTGGGTGGATGGTTCAGTCCATTCGTTTGGAGGGTTACGATTGCTCTCAACATCAAATCTCTGGAATATGAAAACATTGAAGAGACCTTGAACCCAAAAAGCCAGCTTCTTCTCCAGCTAAATCCTGTTCACAAGAAAATCCCAGTGCTCCTTCATGGAGACAAACCCATCTGTGAATCTAGAATCATCGTCGAATACATAGACGAGGTTTGGAACTCCGGTCCCTCCATCCTACCTGCAGATGCTTACGATCGAGCCATGGCTCGTTTCTGGGCTGCCTACATCGATGACAAGTGTTTTGTGGCCATGAGAAATGTTCTTCTTGAAGAAGACGAAGAAGCAAGGAAGCTATACCTGGAGGAAGTAGAAGATGCGCTTGTGACAATGGAAGGTGAGTTGCATAAGTGTTGCAGAGAAGAAGGAAAGGGATTTTTTGGAGGAAAAGAAATTGGGTTGGTTGATATTACTTTTGGAAGCCTGCTGCGTTGGTTGAGTGCGATAGAGACTATGAACGGAAGAAAGTTGATGGTTGAAGCGAAGCATCCTGGATTGGTGAAATGGGCAGAGAGATTCGGGTCTGATCCTAACGTGAAGGGGTTGATACCTGAAACTGAGAAACTCATTGAATATGCAAAGGCTCTTCAGATGAAATTGAAAGCTGCTGCGGCTTCTGCAGAGTGA 705 0.4525 MVNTGLKLLGGWFSPFVWRVTIALNIKSLEYENIEETLNPKSQLLLQLNPVHKKIPVLLHGDKPICESRIIVEYIDEVWNSGPSILPADAYDRAMARFWAAYIDDKCFVAMRNVLLEEDEEARKLYLEEVEDALVTMEGELHKCCREEGKGFFGGKEIGLVDITFGSLLRWLSAIETMNGRKLMVEAKHPGLVKWAERFGSDPNVKGLIPETEKLIEYAKALQMKLKAAAASAE 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4250g00004 234 Gene3D Glutaredoxin 1 85 - -
Pral4250g00004 234 Pfam Glutathione S-transferase, C-terminal domain 93 201 IPR004046 -
Pral4250g00004 234 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Pral4250g00004 234 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 222 IPR010987 -
Pral4250g00004 234 SFLD Main.3: Omega- and Tau-like 4 230 IPR045073 -
Pral4250g00004 234 CDD GST_C_Tau 90 222 IPR045074 GO:0004364|GO:0006749
Pral4250g00004 234 FunFam Glutathione S-transferase GSTU6 1 86 - -
Pral4250g00004 234 FunFam Glutathione S-transferase U9 86 229 - -
Pral4250g00004 234 SUPERFAMILY Thioredoxin-like 6 107 IPR036249 -
Pral4250g00004 234 Gene3D - 86 231 - -
Pral4250g00004 234 Coils Coil 127 147 - -
Pral4250g00004 234 CDD GST_N_Tau 6 79 - -
Pral4250g00004 234 SUPERFAMILY GST C-terminal domain-like 77 223 IPR036282 -
Pral4250g00004 234 SFLD Glutathione Transferase (cytosolic) 4 230 IPR040079 -
Pral4250g00004 234 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Pral4250g00004 234 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 216 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4250g00004 Pral-Chr4250 30154 30955 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4250g00004 1 228 Glutathione S-transferase Gene Family AT1G10370 53.712 3.75e-81 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4250g00004 K00799 - gmx:547576 280.026