Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4250g00001 ATGTCTTCTCCTTCAACCTCTTCCTTTCCCATCTTCACTCTCTGCATCCTCCTCCTCAGCTTCCTATCGCAGCTTGCTTCTGCTCACACTTGTTCTTCACACCCACAAACGTCGTCTTCTTCTTATTCTCCTTGCCCACCTTTCACTTCGAATCCTCCTTTTCCATTCTCTTTCTCACCAGGCTGTGGCCACCCTTCCTTCCAAATTCAATGCTCTACTCCTCATTCTCTCATCTCCATTAACAACATAACTTTCTCTGTTCTTAGTTATAACCCCAATTCTTCTTCGCTTACCCTATTGCCTAATCTTGATGATGCATCAGAAGCAGCAAGTTCAGCCGCCCGCAGAAATTGCTCCACTCCTCGCTTACTTTCTATTCTCAATCGTTCTATTAATCTCTCTGGCTCTCCTTTCACAATCTCCGATGCTCTCTGTTCCCGACTCTCTGATATCCAACCTTGCTCGCCTCCCAGTCTGCCAAACTGCAGCCACTGTCCGTGGGAATGTAGCCTCATCAAGAACCCGGCTCACCTCCTCCGTGGCTGCGGATCTGCCCGTCGCTCCGTTTCAGACTCAGACGGTCGCTGCGAAAGTGATGTTTTGGGGTATCTCGACAACATACTTGCTCGAGGGATGGAAGTCGAGTGGAATGAAGCTCAAGATCCTTACTTTTCAAGCTGCAGAAACTGCAGCGCCAACAAGGGAGTTTGTGGATTCAATTCATCGGACCCACACAACCAATTTATGTGCCTTCTCTCCAAATCTGAATCTGGTTTTTCGCCTGGTTGGATTCGAAGGGTGAATCCCAAGCGTAACACAGTTTTGTCCCTTGTCATCCCTTTAATGTTGCTGCTGCTTTTTGTTTCTGTCGCTGCTGCAATTTTCCGCTCGAGGAGATTCAAGTCATCGAAGACAGAGGAGGACCCAACAATCCTTTTTCTTCACAACCAGCGCTCGGCTAGTCTTCTTCCTCCCGTCTTCACCTACGAGGAACTGGAGGCTGCCACTAATCGGTTCGACTCGAAACGCAAAATTGGCGATGGCGGGTTCGGGTCGGTGTACCTGGGGCAGCTCCACGATAGCAGAATCGTCGCCGTGAAGTACCTCCATAAGCACCACGCGGAGGTCGCCGCGGGACGAGCTTTTTCCACCAAGTCTTTTTGCAACGAAATTTTGATTCTATCTTCCATCGACCACCCGAATCTAGTCAAGCTTCACGGGTATTGCAGCGACCCGAGAGGATTGCTTCTAGTCTACGACTATGTCCCCAACGGAACCCTCGCAGATCATCTTCATGGCCCCAAGAGTTCATTCCAAAAAGGGTCTCTCACGTGGCAAGTGAGGCTCGATATTGCTCTACAAACAGCATTAGCCATGGAGTACCTTCACTGCTCAGTTGTGCCCCCGATAGTTCACAGAGACATCACTTCGTCCAACATCTTCGTGGAGAGGGACATGAGGATTAAAGTTGGAGACTTTGGGCTGTCTCGGCTATTGGTTTTGCAGGATTCATCGTCGTCTTCAACTGGGTATGTCTGCACCGGCCCCCAAGGTACACCCGGATACTTGGATCCGGATTACCACCGGTCGTTCCGATTAACGGAGAAGAGTGACGTGTACAGCTTTGGGGTGGTGTTGCTGGAGCTGATTTCCGGGTTGAAGGCGGTGGATCAGAGCCGTGACAAGCGGGAAGTCGCGTTGGCCGATCTGGTGGTCTCCAGAATCCACATGGGTCAGCTGAATCAGGTAGTGGACCCTGTTTTGGCGAAGGAAGAAGTGATGGACGCCGTCGCCGCGGTGGCGGAGCTGGCGTTCCGTTGCGTGGCGGCGGACAAGGACGACCGCCCGGACTCAAAAGAAGTGGTGGAGGAGCTGAAGCGGGTACGGATCCAGACCCAGGCGGGGCTTCGATCGGCGTCGAATTCCCACGCAGGTGCTGAAGTGAGGGATTGTGGATTGTGA 1962 0.5183 MSSPSTSSFPIFTLCILLLSFLSQLASAHTCSSHPQTSSSSYSPCPPFTSNPPFPFSFSPGCGHPSFQIQCSTPHSLISINNITFSVLSYNPNSSSLTLLPNLDDASEAASSAARRNCSTPRLLSILNRSINLSGSPFTISDALCSRLSDIQPCSPPSLPNCSHCPWECSLIKNPAHLLRGCGSARRSVSDSDGRCESDVLGYLDNILARGMEVEWNEAQDPYFSSCRNCSANKGVCGFNSSDPHNQFMCLLSKSESGFSPGWIRRVNPKRNTVLSLVIPLMLLLLFVSVAAAIFRSRRFKSSKTEEDPTILFLHNQRSASLLPPVFTYEELEAATNRFDSKRKIGDGGFGSVYLGQLHDSRIVAVKYLHKHHAEVAAGRAFSTKSFCNEILILSSIDHPNLVKLHGYCSDPRGLLLVYDYVPNGTLADHLHGPKSSFQKGSLTWQVRLDIALQTALAMEYLHCSVVPPIVHRDITSSNIFVERDMRIKVGDFGLSRLLVLQDSSSSSTGYVCTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLKAVDQSRDKREVALADLVVSRIHMGQLNQVVDPVLAKEEVMDAVAAVAELAFRCVAADKDDRPDSKEVVEELKRVRIQTQAGLRSASNSHAGAEVRDCGL 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4250g00001 653 Gene3D Transferase(Phosphotransferase) domain 1 422 646 - -
Pral4250g00001 653 FunFam Putative serine/threonine-protein kinase At1g18390 family 315 421 - -
Pral4250g00001 653 Gene3D Phosphorylase Kinase; domain 1 315 421 - -
Pral4250g00001 653 ProSitePatterns Tyrosine protein kinases specific active-site signature. 470 482 IPR008266 GO:0004672|GO:0006468
Pral4250g00001 653 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 14 632 IPR044652 GO:0004672
Pral4250g00001 653 SUPERFAMILY Protein kinase-like (PK-like) 323 626 IPR011009 -
Pral4250g00001 653 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Pral4250g00001 653 Pfam Protein kinase domain 340 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4250g00001 653 ProSiteProfiles Protein kinase domain profile. 339 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4250g00001 653 CDD STKc_IRAK 345 627 - -
Pral4250g00001 653 Pfam Wall-associated receptor kinase C-terminal 201 253 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4250g00001 Pral-Chr4250 13000 15684 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4250g00001 45 635 Receptor kinase-like Gene Family AT1G69910 63.547 0.0 730
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral4250g00001 Pkinase 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4250g00001 - - qsa:O6P43_033079 852.432