Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4244g00021 ATGGGAAGTGCACCATTACCACCAGGTTTTCGTTTCCACCCAACAGACGAAGAGCTGGTCGGATATTATCTTAAGAGAAAAGTAGAGGGGCTTGAAATAGAGCTTGAGGTTATCCCAGTCATTGATTTATACAAATTTGATCCATGGGAATTGCCAGAGAAATCATTCCTACCGAAGAGAGATATGGAGTGGTTTTTCTTTTGTCCACGAGATCGAAAGTGGCCAAATGGATCGCGAACAAATAGAGCTACCAAAACCGGGTACTGGAAAGCCACTGGAAAAGACAGAAACATAGTGTGTCAATCAACTCCATTCACTGTTACAGGATGTAGAAAGACCCTTGTTTTTTATCGCGGAAGAGCTCCACTTGGAGATCGAACCGAGTGGGTCATGTATGAATATCGACTCAATAATGACTCTGATCTCTCATCACCTTGTTTTCAGGGTGGTTTTGCATTGTGCAGAGTGATAAAGAAGAATGAGAAGACCAGGAGTTCGCAAGAAGAACAAAAGGGTAAGGCTGCAGGAAGAAGTTGCAACAGTGGGAATGAAGAAGCTTCCATGAAGACTTCACACCATGTGGCTCCAACAGTGGCAGAGCCTGAGCAAGCTTCTTCCTTGGAGTCCATCAACCCTTCACATTTTGATGTCTCTCCTGAATTAATTCTAGATTCTTCCATGGACTATTGCTCTGAAGTACAAGATTCCATGTCTGGATACTTTCCACAGTACGACTTATCGTGTTCAATGAATCCATGGCAACCATTCCTGCCAAGAGAAAATTCAACCTCTTCATCTTACTCAAATGTAAATGGAGAAATTGAATTTGCTGAAGATATCAATCAATTTGGCTGCTCATATGTAAACGGGCATGTGGCTCATGAAGGCTTTGATCAGATCAATTCATTCAGATATCCAAAACCGTTCTGA 930 0.4226 MGSAPLPPGFRFHPTDEELVGYYLKRKVEGLEIELEVIPVIDLYKFDPWELPEKSFLPKRDMEWFFFCPRDRKWPNGSRTNRATKTGYWKATGKDRNIVCQSTPFTVTGCRKTLVFYRGRAPLGDRTEWVMYEYRLNNDSDLSSPCFQGGFALCRVIKKNEKTRSSQEEQKGKAAGRSCNSGNEEASMKTSHHVAPTVAEPEQASSLESINPSHFDVSPELILDSSMDYCSEVQDSMSGYFPQYDLSCSMNPWQPFLPRENSTSSSYSNVNGEIEFAEDINQFGCSYVNGHVAHEGFDQINSFRYPKPF 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4244g00021 309 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
Pral4244g00021 309 SUPERFAMILY NAC domain 3 159 IPR036093 GO:0003677|GO:0006355
Pral4244g00021 309 MobiDBLite consensus disorder prediction 162 204 - -
Pral4244g00021 309 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
Pral4244g00021 309 FunFam Nac domain-containing protein 86 15 162 - -
Pral4244g00021 309 Gene3D NAC domain 15 165 IPR036093 GO:0003677|GO:0006355
Pral4244g00021 309 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 206 - -
Pral4244g00021 309 MobiDBLite consensus disorder prediction 172 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4244g00021 Pral-Chr4244 210883 212584 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4244g00021 1 309 NAC Transcription Factor Family AT4G17980 51.572 1.17e-96 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4244g00021 NAM 1.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4244g00021 - - gmx:100796849 419.468