Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4244g00017 ATGGCTGAGAAGTCCAGCAGACCTGACGAGGAGTTGAAAGTGCTTGGCAAAAATAAGATCAATCAAAATTTGGATGTGTACATATGGGACATGGACGAGACCCTTATACTGCTGAACTCTTTGCTGAAGGAGTCCTATGCAGAGGCTTTTAATGGATTGAAGGATGTCCAGAAGGGTGTGGAAATTGGGAGGATGTGGGAAAAGCTCATCCTGCAATTATGTGATGATTATTTCTTCTATGAGCAAATTGAAAATTACAATAAGCCATTTCTTGATATTTTGAACCAATATGATGATGGAAGGGACCTCTCTGATTATGACTTCAACCAAGATGGCTTGGGTGCTCCCCATGATGATGACAACAAAAGAAAGCTTGCATACAGGCATCGAGTTATAGCGCAAAAGTACATATTGGGTTTAAAGAATCTCTTAGACCAGGAGACGCTTAAACTCTGGGATCAATTGTATGAGACAACTGATGCATATACTGATAGTTGGCTTTCCTCAGCACGGGCATTTCTGAAGGAATGTTTGGGTGAAAATAAGGATGCAGATTCCTCTGTTGCGCTTCCTGAGACCAGTGCTAACTCAACCAATATGACACACCGGCATCTTAATGTTTTAGTGACATCTGGATCGTTGATACCCACCCTTGTAAAATGCATGCTCTTCCGTATTGACAACCTGATAACTCATGAAAATATTTATAGCTCATGGGACGTGGGGAAAGTTCAGTGCTTCCGATGGATAAAGGAGCGTTTTGACCTTCCCAATGTACGTTTTTGTGTGATTGGAGATGGATGGGAAGAGTGTGAAGCGGCAAAAATCATGAAATGGCCGTTTGTCAAGATTGACCCACGGCCAGGCACACCATACAGATTTCCTGGGCTCACATTGAGAACAGTGAGCCACTACTTTTCTGTGGTGTATGGAAGTCTGAATGATGAGAACGATGAAGAATAG 963 0.4247 MAEKSSRPDEELKVLGKNKINQNLDVYIWDMDETLILLNSLLKESYAEAFNGLKDVQKGVEIGRMWEKLILQLCDDYFFYEQIENYNKPFLDILNQYDDGRDLSDYDFNQDGLGAPHDDDNKRKLAYRHRVIAQKYILGLKNLLDQETLKLWDQLYETTDAYTDSWLSSARAFLKECLGENKDADSSVALPETSANSTNMTHRHLNVLVTSGSLIPTLVKCMLFRIDNLITHENIYSSWDVGKVQCFRWIKERFDLPNVRFCVIGDGWEECEAAKIMKWPFVKIDPRPGTPYRFPGLTLRTVSHYFSVVYGSLNDENDEE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4244g00017 320 NCBIfam EYA conserved domain 25 302 IPR006545 GO:0007275
Pral4244g00017 320 Gene3D - 25 290 IPR038102 -
Pral4244g00017 320 PANTHER EYES ABSENT 17 306 IPR028472 GO:0004725
Pral4244g00017 320 FunFam Eyes absent homolog 25 294 - -
Pral4244g00017 320 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 25 285 - -
Pral4244g00017 320 SUPERFAMILY HAD-like 23 292 IPR036412 -
Pral4244g00017 320 SFLD Haloacid Dehalogenase 25 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4244g00017 Pral-Chr4244 173643 175776 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4244g00017 24 320 Protein tyrosine phosphatase (PTP) family AT2G35320 58.923 6.95e-135 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4244g00017 - - gmx:100799315 516.153