Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4244g00013 ATGGCTGAGAAGTCCAGCAGACCTGACGAGGAGTTGAAAGTGCTTGGCAAAAATAAGATCAATCAAAATTTGGATGTGTACATATGGGACATGGACGAGACCCTTATACTGCTGAACTCTTTGCTGAAGGAGTCCTATGCAGAGGCTTTTAATGGATTGAAGGATGTCCAGAAGGGTGTGGAAATTGGGAGGATGTGGGAAAAGCTCATCCTGCAATTATGTGATGATTATTTCTTCTATGAGCAAATTGAAAATTACAATAAGCCATTTCTTGATATTTTGAACCAATATGATGATGGAAGGGACCTCTCTGATTATGACTTCAACCAAGATGGCTTGGGTGCTCCCCATGATGATGACAACAAAAGAAAGCTTGCATACAGGCATCGAGTTATAGCGCAAAAGTACATATTGGGTTTAAAGAATCTCTTAGACCAGGAGACGCTTAAACTCTGGGATCAATTGTATGAGACAACTGATGCATATACTGATAGTTGGCTTTCCTCAGATTCCTCTGTTGCGCTTCCTGAGACCAGTGCTAACTCAACCAATATGACACACCGGCATCTTAATGTTTTAGTGACATCTGGATCGTTGATACCCACCCTTGTAAAATGCATGCTCTTCCGTATTGACAACCTGATAACTCATGAAAATATTTATAGCTCATGGGACGTGGGGAAAGTTCAGTGCTTCCGATGGATAAAGGAGCGTTTTGACCTTCCCAATGTACGTTTTTGTGTGATTGGAGATGGATGGGAAGAGTGTGAAGCGGCAAAAATCATGAAATGGCCGTTTGTCAAGATTGACCCACGGCCAGGCACACCATACAGATTTCCTGGGCTCACATTGAGAACAGTGAGCCACTACTTTTCTGTGGTGTATGGAAGTCTGAATGATGAGAACGATGAAGAATAG 918 0.4237 MAEKSSRPDEELKVLGKNKINQNLDVYIWDMDETLILLNSLLKESYAEAFNGLKDVQKGVEIGRMWEKLILQLCDDYFFYEQIENYNKPFLDILNQYDDGRDLSDYDFNQDGLGAPHDDDNKRKLAYRHRVIAQKYILGLKNLLDQETLKLWDQLYETTDAYTDSWLSSDSSVALPETSANSTNMTHRHLNVLVTSGSLIPTLVKCMLFRIDNLITHENIYSSWDVGKVQCFRWIKERFDLPNVRFCVIGDGWEECEAAKIMKWPFVKIDPRPGTPYRFPGLTLRTVSHYFSVVYGSLNDENDEE 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4244g00013 305 Gene3D - 25 275 IPR038102 -
Pral4244g00013 305 NCBIfam EYA conserved domain 25 287 IPR006545 GO:0007275
Pral4244g00013 305 SUPERFAMILY HAD-like 23 277 IPR036412 -
Pral4244g00013 305 PANTHER EYES ABSENT 17 291 IPR028472 GO:0004725
Pral4244g00013 305 FunFam Eyes absent homolog 25 279 - -
Pral4244g00013 305 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 25 270 - -
Pral4244g00013 305 SFLD Haloacid Dehalogenase 25 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4244g00013 Pral-Chr4244 173643 176342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4244g00013 24 305 Protein tyrosine phosphatase (PTP) family AT2G35320 58.478 3.08e-128 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4244g00013 - - gmx:100799315 482.256