Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4244g00009 ATGGATTCACGGGAACCTCCTCAGCCCCCTCAACCGCCGCAACTACAGTCGATGGCACAAGCACAACATCCGTCAGCGGCGCCAAACATGATGATGGGACCGACTTCATATGGTTCTGCCATGCCGAACCCGAACACATCTCCCATGATCAGCCCCAATTCGACGGCCGCGATGATGGCCCCTGCCACCGCCGCACGATTCCCCTTCAACACCATGGTTCCACAACCCCCTGCTCCGTCTAAACCTATGGAACATCTAAACAACAATGCTAGTCCTTTCGATGGGTCATCGTCCGCGATGAGGCCATGTGGGTTTAATATTGATTCTACGAAGAAGAAGAGAGGCCGGCCGAGGAAGTATTCGCCGGATGGTAACATTGCTTTGGGTTTGACTCCCACGCCTATGTCTACTTCTGCTGGTCAAGGAGATTCGAGTGGTACCCCTTCGACGGAACCTGGAACGAAGAAGCACAGGGGAAGGCCACCGGGTTCTGGAAAAAGGCAGCTGGATGCTCTTGGAACTGGCGGTATTGGTTTTACCCCGCACGTGATATTGGTAAAAGCCGGTGAGGATATAGCTGGAAAGATTGTGGCCTTTTCAAAGCAAGGGCCTAGGACAGTTTGTATTCTTTCTGCCATTGGTGCAATTAGCAATGTTACCCTTAGACAGGCAGCAATTTCTGGCGGTACTGTGCAATACGAGGGCCGATTTGAGATCATATCTCTATCGGGTTCTTTCTTGCCATGTGATGATAATGGCCGTAGCAGAGCAGGTGGCTTTAGTGTGTCTCTTGCGGGATCAGATGGTAAAGTTTTAGGTGGTGGAGTTGCTGGAATGCTAATCGCCGCATCACCAGTGCAGGTCATCGTGGGTAGCTTTATTGCTGATGGGAAAAAGTCGAACTCAAATATTCAGAAATCAGGGCCTTCTTCAGCACCAGCCTCCCAAATGTTAAATTTTGGTGCACCTACGACTTCTACCAGCCCTGCCTCTCAAGGCCCTTCATCTGAGTCCTCTGATGAGAATGACAATAATAGTGATTTTAATAGGGGACCTGGACTCTACAATAATAATAGCCAGCCCATTCACAATATGCAGATGTATCATCCTCAACTATGGGCTGGTCAAACGCAGCAGTGA 1140 0.5009 MDSREPPQPPQPPQLQSMAQAQHPSAAPNMMMGPTSYGSAMPNPNTSPMISPNSTAAMMAPATAARFPFNTMVPQPPAPSKPMEHLNNNASPFDGSSSAMRPCGFNIDSTKKKRGRPRKYSPDGNIALGLTPTPMSTSAGQGDSSGTPSTEPGTKKHRGRPPGSGKRQLDALGTGGIGFTPHVILVKAGEDIAGKIVAFSKQGPRTVCILSAIGAISNVTLRQAAISGGTVQYEGRFEIISLSGSFLPCDDNGRSRAGGFSVSLAGSDGKVLGGGVAGMLIAASPVQVIVGSFIADGKKSNSNIQKSGPSSAPASQMLNFGAPTTSTSPASQGPSSESSDENDNNSDFNRGPGLYNNNSQPIHNMQMYHPQLWAGQTQQ 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4244g00009 379 CDD DUF296 180 293 IPR005175 -
Pral4244g00009 379 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 58 350 IPR039605 GO:0003680
Pral4244g00009 379 ProSiteProfiles PPC domain profile profile. 175 314 IPR005175 -
Pral4244g00009 379 Pfam Plants and Prokaryotes Conserved (PCC) domain 181 293 IPR005175 -
Pral4244g00009 379 SUPERFAMILY AF0104/ALDC/Ptd012-like 179 294 - -
Pral4244g00009 379 Gene3D - 181 306 - -
Pral4244g00009 379 MobiDBLite consensus disorder prediction 1 48 - -
Pral4244g00009 379 MobiDBLite consensus disorder prediction 130 152 - -
Pral4244g00009 379 MobiDBLite consensus disorder prediction 300 363 - -
Pral4244g00009 379 MobiDBLite consensus disorder prediction 74 173 - -
Pral4244g00009 379 MobiDBLite consensus disorder prediction 82 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4244g00009 Pral-Chr4244 121258 127139 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4244g00009 81 379 AT-hook Motif Nuclear Localized (AHL) Family AT4G17950 48.105 8.73e-78 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4244g00009 - - qsa:O6P43_033975 523.087