Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4244g00007 ATGGCTGGTCTGGATTTAGGCACTGCTTCTCGCTTTGTTCCAAATCTCCACAGGCCTAACTTGCGCTTTCCCCAGCAGCAGCAGCAACACGAATCCGAGGAAGATGCGCATCGGGCCGATCCCTTTTCCAGCGACGACGGTCCCCACCAAGGCCTGGAGCTCGCCTCCACCGGACCCGGCGACATCGTGGCCCGTCGACCCCGCGGTAGGCCACCGGGCTCCAAGAACAAGCCCAAACCACCGGTCATAATAACCAGAGAGAGTGCCAACACCCTCCGAGCTCATATTCTCGAAGTCGGTAACGGTTGCGACGTGTTCGACTGCGTTGCCAACTACGCTCGCCGGAGGCAGCGTGGGATCTGTATTCTAAGCGGAAGTGGCACGGTGACGAATGTGACCCTAAGGCAACCAGGAGGTGCTGGAGCTGTAGTGAGTCTCCACGGGAGGTTCGAGATATTGTCGTTGTCGGGATCGTTCCTACCGCCTCCGGCGCCACCCGGTGCGACCAGCCTCACGATATACTTGGGCGGAGGGCAAGGGCAAGTTGTCGGAGGAAGCGTGGTGGGAGAGCTGAGGGCGGCGGGTCCGGTGATCGTGATCGCTTCTTCGTTCACGAACGTGGCGTACGAGAGACTTCCGTTGGACGACGAGGAGCAGGAGCAGCTTCAGATGCAGACAGCTGGCTCCGGTCAAGGCGGCTCCGGTGGCGGCGGAGGGAACAACTCATATCCTGACCCCTCTTCCGGTCTACCTTTCTTCAATTTGCCGCTTAATATGCCGCAGCAGCAGCACAATGTTCAGTTGCCGGTCGACGGCTGGGCCGGAAACTCCGGTCCACGTCCGTCCTTTTAA 852 0.5998 MAGLDLGTASRFVPNLHRPNLRFPQQQQQHESEEDAHRADPFSSDDGPHQGLELASTGPGDIVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGNGCDVFDCVANYARRRQRGICILSGSGTVTNVTLRQPGGAGAVVSLHGRFEILSLSGSFLPPPAPPGATSLTIYLGGGQGQVVGGSVVGELRAAGPVIVIASSFTNVAYERLPLDDEEQEQLQMQTAGSGQGGSGGGGGNNSYPDPSSGLPFFNLPLNMPQQQHNVQLPVDGWAGNSGPRPSF 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4244g00007 283 MobiDBLite consensus disorder prediction 219 258 - -
Pral4244g00007 283 SUPERFAMILY AF0104/ALDC/Ptd012-like 89 223 - -
Pral4244g00007 283 Pfam Plants and Prokaryotes Conserved (PCC) domain 93 206 IPR005175 -
Pral4244g00007 283 Gene3D - 92 229 - -
Pral4244g00007 283 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 28 239 IPR014476 GO:0003680
Pral4244g00007 283 MobiDBLite consensus disorder prediction 1 83 - -
Pral4244g00007 283 MobiDBLite consensus disorder prediction 217 258 - -
Pral4244g00007 283 FunFam AT-hook motif nuclear-localized protein 92 219 - -
Pral4244g00007 283 PIRSF ESCAROLA 9 283 IPR014476 GO:0003680
Pral4244g00007 283 ProSiteProfiles PPC domain profile profile. 89 225 IPR005175 -
Pral4244g00007 283 MobiDBLite consensus disorder prediction 264 283 - -
Pral4244g00007 283 MobiDBLite consensus disorder prediction 28 44 - -
Pral4244g00007 283 CDD DUF296 93 168 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4244g00007 Pral-Chr4244 108507 110061 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4244g00007 1 283 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 65.033 5.44e-99 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4244g00007 - - qsa:O6P43_024484 404.831