Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4244g00003 ATGGCAGAAGCAAAAGCGTGTTATGTTGAAGAAGTATTTAATCCTAATGAGATCTGGAAAACGGGCTCCATTTTGACCAAATACGCCCCCCTATTGTTTCTGCAGATTGCTTTCAATATCTTCATCTGCAACATCTTTCACTACATTCTTAGACCTCTTCATCAACCTCGTCTTATCGCTGAGGTTCTTGCCGGTATGTGTCTGGGTCTTTTCTTAGCTACAGACAACATAGTGGTTCGCTTTCTCCTACCTTCGGAAGGAGTCATCAACCTTGAAACATACGCAGCTATGGGCATCATGTGTTATTGCTTCCTTAGTGGATTGGAAATGAATTTAGATGACATTCTCAAAGTACAAAAGAAGAAAGCCGGAAGCATTTCCATTGCCATTTCTGGTATCATCATCCCAATGTTGATGGGATTGGGCTTCTATGCTCTAATAGAAAAACTTTACCAAGAGCCGTCAATTTTGATATTTAGAGCGGATAATCAATTCAAAGCTAAAGCTTATTTGTTCTGGAGTTTAGCCCTAACCATTACGAGTTTTCCTGTGCTTGCTCGTATTCTTGCTGATCTCAAACTCCTTTACACCGGCCTAGGCAAAGCCACCTTAACGACAGCCATGATTAGCGACACCTATGGTTGGCTTTTACTCATAATATTAATCCCATTTGCAAATAACGATGTGCAGGCCTTTTGGTCGGTGTTGGGTACGGTAACGTTCATCGCTTTCTGCATCTTCGTATTGCGCCCTGTCATGACGAAATACATTGAGGGGAGCAAGAATGAAGAAGAAGATACATGGGATAATTCTTTGTTGCTGGTGGTGTTGATGGGGACTTTTGCTTGTTCGTTTGTTACAGATGTGCTTGGCACGCATTCTATTGTAGGGGCTTTTGTGTACGGACTGGTTTTACCTCATGGGAGGTTCGCTGATTTTGTGATGAGGAAGTTGGATGATTTTGTTTCTGTGGCTATGTCACCTGTCTTCTTCTTCCGTTCTGGCTTAACCGTTAACTTCTTCATGCTTGCCCAGCAAACATATTGGCCTTGTATGGTCCTAATTATGTTCTTGCTATCCATCCCAAAAGTTGTAAGCACTTTGATAGCCACCTTTTTCTTCGGTGTGCCCATTCGAGATGGTGTGGGTATTGGACTCCTCCTCAACTCTAAAGGCGTCTTGGCCATCATAATTCTAAACACAGCTTGGGATAGAAAGATTTTGTCCGTGGTAGCATTTTCAATTATGGTGTGTGCAGTTCTCATGATGACAATCTTGGTGCCTCTTTTGGTTAATGCAATATATAAACCAAGAAAAAGATACGAGAATGTCAGGTTAAGGACCATTGAAAAGTTAAGGATGGATTCGGAGGTCCGAGTTATATCTTATGTACTCAATATTCGGCAAGCTACAAGCATGGTGAACGTCCTAAGAGCATTTAATGCTACCAGAATTTCTCCATTACACGTGTTTGGAGTTCATCTTGTTGAACTCATTGGACGAGCTACTGCACTTTTTGCTTCCCAAATAAAGCGGAACCCTGCAAATAATTCTGAACTGCAAAACCTTTCCCATTCACAATTATTGTCAGAGAACATTAGCACCATCTTTAAGACTCTAGCAGAGGCATGTGCTGCAGTTAGAGTCCAAACTCTTGATGTTGTTTCAAACTATGAAACCATCCACCGGGACATACAAGACTTGGCAGAGCAAAAACGAACAGCTTTAATTCTCATGCCTTTTCACAAAGAACTAGACGTAAATGGTGATCTGGAGACAAGCAATGATGATGAAGTATGCAGGAACATAAACCAGAATGTTCTGCAAGATGCACCTTGTTCTGTGGCAATCTTTGTGGATCGTGGTCTTGGGTCATTGTCCAGAATCAACTTACACATTATGATGATCTTCATCGGAGGGCCTGATGATCGTGAAGCCTTAGCCATTGCTTGGAGAATGGCCAGGCATCCGGGAAATAAGCTCTCAACGATACGAATTCTTTTGTCTGGTGAGGCTGCAGCAAAAGCAGAAACATCAAACCACGATGAAATTCAATGGCTATCTTCCGCAGCAGAAGATGAAGAAAGCCAAAAGTTGCTAGATGAAGAGTGTATAGAATCGTTCAGATTCAAAGGGGTTTATAACAATGATTCTATAACATACTCAGAGGAGGAAGTACACAACAGTGAGGAATTCATGTCACTTCTCCATGAATTAGATAAAGACGACTGTGATTTGTACATTATTGGACGAGGGAGGGGTGGGAACTCGGTGATGTTTTTAAATTTCATGGAATGGTGTGATAACCCAGAACTTGGAGTTATAGGGGACATAGTGACATCAAAGTCTTTCGGTTCTCGATCCTCCTTGCTTTCTGTCCAGCAATTTGGATCTAGAGTTATGATGTTTGGGGATAGAGATGTCCCCACAAAGACTGATGGAGGAGGATCTGAGCCTTTTGTAAACACACTATAA 2475 0.4182 MAEAKACYVEEVFNPNEIWKTGSILTKYAPLLFLQIAFNIFICNIFHYILRPLHQPRLIAEVLAGMCLGLFLATDNIVVRFLLPSEGVINLETYAAMGIMCYCFLSGLEMNLDDILKVQKKKAGSISIAISGIIIPMLMGLGFYALIEKLYQEPSILIFRADNQFKAKAYLFWSLALTITSFPVLARILADLKLLYTGLGKATLTTAMISDTYGWLLLIILIPFANNDVQAFWSVLGTVTFIAFCIFVLRPVMTKYIEGSKNEEEDTWDNSLLLVVLMGTFACSFVTDVLGTHSIVGAFVYGLVLPHGRFADFVMRKLDDFVSVAMSPVFFFRSGLTVNFFMLAQQTYWPCMVLIMFLLSIPKVVSTLIATFFFGVPIRDGVGIGLLLNSKGVLAIIILNTAWDRKILSVVAFSIMVCAVLMMTILVPLLVNAIYKPRKRYENVRLRTIEKLRMDSEVRVISYVLNIRQATSMVNVLRAFNATRISPLHVFGVHLVELIGRATALFASQIKRNPANNSELQNLSHSQLLSENISTIFKTLAEACAAVRVQTLDVVSNYETIHRDIQDLAEQKRTALILMPFHKELDVNGDLETSNDDEVCRNINQNVLQDAPCSVAIFVDRGLGSLSRINLHIMMIFIGGPDDREALAIAWRMARHPGNKLSTIRILLSGEAAAKAETSNHDEIQWLSSAAEDEESQKLLDEECIESFRFKGVYNNDSITYSEEEVHNSEEFMSLLHELDKDDCDLYIIGRGRGGNSVMFLNFMEWCDNPELGVIGDIVTSKSFGSRSSLLSVQQFGSRVMMFGDRDVPTKTDGGGSEPFVNTL 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4244g00003 824 Gene3D - 472 762 - -
Pral4244g00003 824 PANTHER CATION/H + ANTIPORTER 23 796 - -
Pral4244g00003 824 Pfam Sodium/hydrogen exchanger family 40 431 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pral4244g00003 824 Gene3D - 31 445 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4244g00003 Pral-Chr4244 40595 43263 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4244g00003 7 809 Antiporter Super Family AT2G13620 36.777 1.86e-173 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4244g00003 - K26731 pcin:129305558 860.907