Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4241g00005 ATGAAACGGCATAGCCGATTGGCCATCCTATTCTTTTTCTTCTGCGTCTTGACTACATTCACTCAACCACACTTCCCTGATCCATGCACGGTAACAAGTTGCGGGGTTGATGGACCTGCCATTCGATTCCCCTTTAGGCTCAAAGGAAAACAGCCAGAATGGTGTGCATATAATCCTGGCTTTGATCTTTACTGTAATGAAACAAACCACACGGTGCTCGAGCTGCCCTTCTCTGTCAAGGTTATCGTACGCGACATTGACTATAAAAAACAATTCTTTGCTGTGTCTGACCCTGATGGATGCCTTGCTCATCTCAATTTATCTGCATCGCCTTTTCGGTCAAATGATTATTATGACTCAAGCCGAAATGCGATATTCAATTGCTCAGGGACGTCTCGTAGAGATTCAAATCAATTTCCAAAATTGGGAAACTTCTCTTGTCTCGATGTTGCCGGCTATGAGGTTTTAGCTGTACCATACTTAGCGGATATCATAGACTATCCTCTTCTATCATGCACGAGAATTCCTGGTTATGCATCAGTCCCCGATTCATTTTTCTATCACAATGAGCTTATATATCTATCTTGGCTCGAACCAGATTGCAGAAAGTGTGAGGACCATGGAGGGCAGTGTAGATTGACAGAAAACAAAGTTGAACGTGAACCTGAATGTTTCCAAAACCCTCATACAGGTCCATCAAAACAAATAGTACTCACTGGTGAAATCCTAGGCCCGTTCCTGCTCATGTTTGTTGGGTTTGTTGTTTATTGGGTTACTGCAGCTAGCCTAGAGAGGCAGGGTTACAAAAAAATTAAACTGTTTTTGGAGGATTACAAAGCACTTAGGCCTGCTAGATACTCGTATGCAGATATAAAGAGGATCACTAATCAGTTCAAGGATGAACTTGGACAAGGAGCTTACGGAACTGTCTTTAAAGGGAAGCTATCTAATGAGATTCAGGTGGCTGTGAAGCTTCTCAACACTTCAACTGGGAATGGACAAGAGTTCATCAATGAAATGGAGACCATGTGTCAAATTCACCATGTCAATGTGGCTCGCTTGGTTGGCTACTGTGCGGATGGATTCAAACGAGCTTTGGTTTATGAATTTTTACCCAATAGTTCATTGCAGAAATTCATAACTTCAGCTGATAGGAAGGACCTTTTCCTGGGATGGGGAAAGCTTCATGATATTGCTCTTGGCATAGCCAAAGGAATTGAGTACCTTCATGAAGACTGTGACAAACGGATCCTCCACTTTGATATCAAACCTCACAACATTCTGTTAGACGACAAATTTACTCCAAAAATATCTGATTTCGGTTTGGCCAAACTCTGTTCTAAGGATCAAAGCATTGTGTCAATGACAACAGCCAGGGGCACTTTGGGCTATATTGCACCGGAGATATTTTCTCGGAACTTTGGCAATGTGTCTTATAAATCAGATGTTTATAGCTATGGAATGTTACTGCTTGAGATGGTTGGAGGAAGGAAAATCACAGATTTCACAGAAGAAAATGGCGAGCAAGTTTACTACCCACAATGGATTTATAATCTTCTAGAGAACAATGAAGACATACAAATCCATGTGGAAGGAGAGGAGGACACTAAAATTGCAAGGAAGCTATCCATTATTGGACTTTGGTGTATTCAGTGGCATCCAGCAAACCGTCCAACCATGAAAAATGTGGTTCAAATGTTGGAAGGGGACGATGAAAAGCTAATCATGCCTCCTAACCCTTTTGGTTCTTCACATGCAATTAGAACAAAGAGCTGTTAA 1779 0.4171 MKRHSRLAILFFFFCVLTTFTQPHFPDPCTVTSCGVDGPAIRFPFRLKGKQPEWCAYNPGFDLYCNETNHTVLELPFSVKVIVRDIDYKKQFFAVSDPDGCLAHLNLSASPFRSNDYYDSSRNAIFNCSGTSRRDSNQFPKLGNFSCLDVAGYEVLAVPYLADIIDYPLLSCTRIPGYASVPDSFFYHNELIYLSWLEPDCRKCEDHGGQCRLTENKVEREPECFQNPHTGPSKQIVLTGEILGPFLLMFVGFVVYWVTAASLERQGYKKIKLFLEDYKALRPARYSYADIKRITNQFKDELGQGAYGTVFKGKLSNEIQVAVKLLNTSTGNGQEFINEMETMCQIHHVNVARLVGYCADGFKRALVYEFLPNSSLQKFITSADRKDLFLGWGKLHDIALGIAKGIEYLHEDCDKRILHFDIKPHNILLDDKFTPKISDFGLAKLCSKDQSIVSMTTARGTLGYIAPEIFSRNFGNVSYKSDVYSYGMLLLEMVGGRKITDFTEENGEQVYYPQWIYNLLENNEDIQIHVEGEEDTKIARKLSIIGLWCIQWHPANRPTMKNVVQMLEGDDEKLIMPPNPFGSSHAIRTKSC 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4241g00005 592 FunFam PR5-like receptor kinase 371 578 - -
Pral4241g00005 592 SMART serkin_6 296 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4241g00005 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Pral4241g00005 592 SUPERFAMILY Protein kinase-like (PK-like) 280 568 IPR011009 -
Pral4241g00005 592 Gene3D Transferase(Phosphotransferase) domain 1 371 575 - -
Pral4241g00005 592 FunFam serine/threonine-protein kinase PBS1-like 268 370 - -
Pral4241g00005 592 Pfam Protein kinase domain 299 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4241g00005 592 Gene3D Phosphorylase Kinase; domain 1 274 370 - -
Pral4241g00005 592 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Pral4241g00005 592 Pfam Wall-associated receptor kinase galacturonan-binding 29 97 IPR025287 GO:0030247
Pral4241g00005 592 PANTHER RUST RESISTANCE KINASE LR10-RELATED 268 583 IPR045874 GO:0004672
Pral4241g00005 592 ProSiteProfiles Protein kinase domain profile. 296 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4241g00005 Pral-Chr4241 27769 29855 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4241g00005 197 580 Receptor kinase-like Gene Family AT1G66910 44.226 2.38e-108 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral4241g00005 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4241g00005 - - tpra:123914140 793.497