Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4241g00004 ATGGTATTCTTGAGAACAAAAGAAAATATTGGAACCAATTATTTTCATGATGATCTAATCGAAACTTCTGTTTTGAATTTTTACAACGCAGCTTTTACTATTGGGAAAGCGATCGGTATAGGTGCACCTTGTGTTTTAATATTCTTGATTCTTCGATGGAGAAGAAGACATCAATCTTATTATGACAATGTTGAGGACTTCCTCCGAAATAATAGTAACCTGATGCCCATCAAGTACTCTTACTCAGAGATCAAGAAAATGACCAATGGCTTCAAACACAAGTTAGGAGAAGGAGGCTATGGTTATGTGTATAAAGGTAAGCTTCGAAGCAATCGCGATGTAGCCATCAAGTTACTGGCAAAGTCCAAAGCCAATAATGCACAAGATTTCATAAGCGAAGTTGCCACTATTGGCAGGATTCATCATGGCAATGTGGTGCAGCTGATTGGATTCTGCACCGAAAGAAGTAAGCGAGCTCTTGTTTATGAATTTATGCCTAATGGATCACTTGACAAGTACATCTTCTTGGAGAGACAAAGCAACACGCCCATCAATTACGAGAAAATGTTTAACATTTCTCTTGGGATTGCTCGAGGAATTGAGTATTTACATCGAGGATGTGATATGCAAATTCTACACTTTGATATCAAACCTCACAATATCCTTCTTGATGAAAATTTTAATCCAAAGATTTCGGATTTCGGATTGGCTAAGTTGTACCCATTAGATAAGAGTATTGTGTCTCTGACAAATGCAAGAGGAACATTTGGATACATGGCTCCTGAATTCTTGTACAAGAACATTGGAGGAATATCACACAAAGCTGATGTTTATAGTTTTGGGATGCTACTAATGGAAATGGCTGGTAGAAGGAAGAACTCGAATGTCATTGAGCATTCCTGGCAGACCTATTTTGCGAAATGGGTTTATGATCAATTTGAGGAATCAATAGAGGGGAGCAATATCTCAGATGAGGAAAGAGGAATTGCAAAGAAGATGATCATAATAGCTTCACATTGCATACAGATGTATCCTAATGATCGACCTTCGATGAAGAATGTGTTAGATATGCTTGAGGGAGAAATGGAGCTTCAAGAGGCTCTTCCTCCCTAA 1113 0.3819 MVFLRTKENIGTNYFHDDLIETSVLNFYNAAFTIGKAIGIGAPCVLIFLILRWRRRHQSYYDNVEDFLRNNSNLMPIKYSYSEIKKMTNGFKHKLGEGGYGYVYKGKLRSNRDVAIKLLAKSKANNAQDFISEVATIGRIHHGNVVQLIGFCTERSKRALVYEFMPNGSLDKYIFLERQSNTPINYEKMFNISLGIARGIEYLHRGCDMQILHFDIKPHNILLDENFNPKISDFGLAKLYPLDKSIVSLTNARGTFGYMAPEFLYKNIGGISHKADVYSFGMLLMEMAGRRKNSNVIEHSWQTYFAKWVYDQFEESIEGSNISDEERGIAKKMIIIASHCIQMYPNDRPSMKNVLDMLEGEMELQEALPP 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4241g00004 370 Pfam Protein kinase domain 92 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4241g00004 370 FunFam PR5-like receptor kinase 165 368 - -
Pral4241g00004 370 ProSiteProfiles Protein kinase domain profile. 89 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4241g00004 370 SUPERFAMILY Protein kinase-like (PK-like) 70 359 IPR011009 -
Pral4241g00004 370 Gene3D Transferase(Phosphotransferase) domain 1 165 367 - -
Pral4241g00004 370 ProSitePatterns Protein kinases ATP-binding region signature. 95 117 IPR017441 GO:0005524
Pral4241g00004 370 Gene3D Phosphorylase Kinase; domain 1 64 164 - -
Pral4241g00004 370 PANTHER RUST RESISTANCE KINASE LR10-RELATED 58 365 IPR045874 GO:0004672
Pral4241g00004 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Pral4241g00004 370 SMART serkin_6 89 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4241g00004 370 FunFam serine/threonine-protein kinase PBS1-like 57 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4241g00004 Pral-Chr4241 24003 25771 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4241g00004 78 369 Receptor kinase-like Gene Family AT5G38280 53.156 2.37e-106 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral4241g00004 Pkinase 1.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4241g00004 - - tpra:123914142 470.7