Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4241g00002 ATGAACTTGGACAAGGAGCTTACGGAACTGTCTTTAAAGGGAAGCTATCTAATGAGATTCTGGTGGCTATCAAGCTTCTCAACACTTCAACTGGGAATGGACAAGAGTTCATCAATGAAATGGAGACCATGTGTCAAATTCACCATGTCAATGTGGCTCGCTTGGTTGGCTACTGTGCGGATGGTTTCAAACGAGCTTTGGTTTATGAATTTTTACCCAATGGTTCATTGCAAAAAATTCATAACTTCAGCTGATAGAAAGGATATTTTCCTGGGTTGGGAAAAGCTTCAAGATATTGCTTTGGGCATAGCCAAAGGAATTGAGTATCTTCATGAAGATTGTGACAAACGGATCCTCCACTTTGATATCAAACCTCACAACATTCTGTTAGATGACAAATTCACTCCAAAAATATCTAATTTCGGTTTGGCCAAACTCTGTTCTAAGGATCAAAGCATTGTGTCAATGACAACAGCTAGGGGCACTTTGGGCTATATTGCACCGGAAATATTTTCTCGGAACTTTGGCAATGTGTCTTATAAATCAGATGTTTATAGCTATGGAATGTTACTGCTTGAAATGGTTGGAGGAAGGAAAATCACAGATGTCACAGAAGAAATGTGGCATCCAGCAAACCGTCCAACCATGAAAAATGTGGTTCAAATGCTGGAAGGGGACGATGAAAAGCTAATCATGCCTCCTAATCCTTTTGGTTCTTCATATGCAATTAGAACAAGAGCTGCTAATGGAGTAAGGCGATTGCAACCAGAGTTATCTACCATTTCAGAAATAGAGTGA 798 0.3985 MNLDKELTELSLKGSYLMRFWWLSSFSTLQLGMDKSSSMKWRPCVKFTMSMWLAWLATVRMVSNELWFMNFYPMVHCKKFITSADRKDIFLGWEKLQDIALGIAKGIEYLHEDCDKRILHFDIKPHNILLDDKFTPKISNFGLAKLCSKDQSIVSMTTARGTLGYIAPEIFSRNFGNVSYKSDVYSYGMLLLEMVGGRKITDVTEEMWHPANRPTMKNVVQMLEGDDEKLIMPPNPFGSSYAIRTRAANGVRRLQPELSTISEIE 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4241g00002 265 ProSiteProfiles Protein kinase domain profile. 1 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4241g00002 265 ProSitePatterns Serine/Threonine protein kinases active-site signature. 118 130 IPR008271 GO:0004672|GO:0006468
Pral4241g00002 265 Pfam Protein kinase domain 77 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4241g00002 265 SUPERFAMILY Protein kinase-like (PK-like) 67 224 IPR011009 -
Pral4241g00002 265 FunFam Os07g0541700 protein 77 162 - -
Pral4241g00002 265 Gene3D Transferase(Phosphotransferase) domain 1 78 232 - -
Pral4241g00002 265 PANTHER RUST RESISTANCE KINASE LR10-RELATED 71 201 IPR045874 GO:0004672
Pral4241g00002 265 SMART serkin_6 25 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4241g00002 Pral-Chr4241 2501 3432 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4241g00002 93 237 Receptor kinase-like Gene Family AT5G38280 46.392 5.96e-51 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral4241g00002 Pkinase 8.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4241g00002 - - tpra:123914140 283.108