Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4241g00001 ATGCAAATTCTACACTTTGATATCAAACCTCACAATATCCTTCTTGATGAAAATTTTAATCCAAAGATTTCGGATTTCGGATTAGCTAAGTTGTATCCATTAGATAATAGTATTGTGTCTCTGACAAATGCAAGAGGAACATTTGGATACATGGCTCCTGAATTCTTGTACAAGAACATTGGAGGAATATCACACAAAGCTGATGTTTATAGTTTTGGGATGCTACTGATGGAAATGGCTGGCAGAAGGAAGAACTCAAATGTCATTGAGCATTCCTGGCAGACCTATTTTGCTAAATGGGTTTATGATCAATTTGAGGAATCAATAGAGGGGAGCAATATCTCAGATGAGGAAAGAGGAATTGCAAAGAAGATGATCATAATAGCTTCACATTGCATACAGATGTATCCTAATGATCGACCCTCGATGAAGAATGTGTTAGAGATGCTTGAGGGAGAAATGGAGCTTCAAGAGGCTCTTCCTCCCTAA 489 0.3783 MQILHFDIKPHNILLDENFNPKISDFGLAKLYPLDNSIVSLTNARGTFGYMAPEFLYKNIGGISHKADVYSFGMLLMEMAGRRKNSNVIEHSWQTYFAKWVYDQFEESIEGSNISDEERGIAKKMIIIASHCIQMYPNDRPSMKNVLEMLEGEMELQEALPP 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4241g00001 162 SMART serkin_6 1 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4241g00001 162 Pfam Protein kinase domain 1 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4241g00001 162 Gene3D Transferase(Phosphotransferase) domain 1 1 159 - -
Pral4241g00001 162 ProSiteProfiles Protein kinase domain profile. 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4241g00001 162 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 157 IPR045874 GO:0004672
Pral4241g00001 162 SUPERFAMILY Protein kinase-like (PK-like) 2 156 IPR011009 -
Pral4241g00001 162 ProSitePatterns Serine/Threonine protein kinases active-site signature. 3 15 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4241g00001 Pral-Chr4241 7 531 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4241g00001 2 162 Receptor kinase-like Gene Family AT5G38280 53.846 5.85e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral4241g00001 Pkinase 1.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4241g00001 - - tpra:123914142 241.506