Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4240g00006 ATGATAACGCAAACCGTCATCTTCCTTACCCTTCTTATTTCTTTTTATTTCCTAGTGTTTGGTTTCTCACCAAAACCAGATTTTGCTCGTGTGCAACATCTTAGGTATAGATATTTCTATAATCGCAATAGCAAAGTGATCAGCGATCCGAGTTACGAACTAGTCTGTGACAAGAACAAAAGCGTGTTATATCTGAACTATGGGAGGCAGCTAGTAGAGGCCATTTATGCCACTAACTCTACCACCACTCTCCAATCCATCACTGCTGGAAATGACATCAACAACTGCTCCGCTATCACTCGTACATACGACAACTTCACCCACGTTTTCTCATCAGCAAAAGAGATGGAACTGAGCGATAAAAATTATCGTTTTTCTGTGGGTGAAGTAGTGTTTGTCAGCTGCAAAAATCCAGTTCTCTCTCCTCTGAATGAGAATATTGTGGCGCTTTGTTCTGCTGAAGAGCCAGAAGCGCAATATTCTTATATGCTGAAGCATTATCCAAGGGCATCTGATGTGGGAGAGTCCTGCAAAATAGATTTGATGGTGAAAATGGTGCCATGGGGACCGATGACATGTAATGAGAAATGCTCATATCAGAAACTTGAGAGTGAAGTGGTAAAGGGGATTCACATCAAATGGCGTGCTGATCGCTGTGGAGTGGCGAACGGAGGGGAACCTAATTGCTGGCTAGAAAATGCCACTAATATGATTCTCTGTCATCAGGATGCAGGACATCCTATTTCTGCAATGTTAATGGAATCCTCTTTGTATTACTCGATTACAGTTGCCTTGTGGTTTGCAGCAAAATTTGCTTTTGGATTCCCAATTTTTGTGGGGTTTCTAATATATAAAATGAGAAGGAGGCATTTATCTGAGTACGATGACATTGAGGACTTCCTACGAAGTCACAGCAATTTAGTGCCTATCAAATACTCTTACTCTGACATAAGAAGAATGACCAAAAATTTCAAGCATAAGTTAGGAGAAGGGGGTTATGGTTCTGTATATAAAGGAAAGCTTCGAAGCAAGCGTGATGTGGCTGTTAAGCTATTAGGCAAGTCAACAACAGATGGGCATGATTTCATCAATGAAGTTTCCACCATTGGAACTATTCGTCATGTAAATGTGGTGCAATTGATAGGATTTTGTGCAGAGAGAAGAAAGCAAGCTCTTGTTTATGAGTTCATGCCAAACGGATCTTTAGATAAATACATACTTTCTCAGCATGAAAAATCATCAATAAATTATGAGAAGATCAATGAGATTTCTTTAGGGGTGGCTCGTGGGATTGAGTACCTACATCAAGGTTGCGACAAGCAAATCCTACACTTTGATATCAAACCTCACAATATTCTTCTTGATGAGAATTTTTCTCCCAAGATTTCAGACTTTGGATTGGCAAAACTATATCCAACAGATAAAAGTATTGTGTCTCTAACTGCAGCTAGAGGCACAATGGGATACATGGCTCCTGAATTGTTGTACAAAAACATTGGAGGCATCTCACACAAGGCTGATGTTTATAGTTTTGGGATGATGCTGATGGAAATGGCAGGAAGAAGAAAGAACTATGATGTTGTGCAGAATTCATGGCAGACTTACTTTGCGAAATGGGTTCATGATCAGTTTGAAGAAACAATATTTAAAAGCAATGCCACAGAAGAAGAGAAGAAGATAGCCCAGAAAATGATTACAGTTGCTTTTACTTGCATACAGCTGAGCCCAAGTGATCGCCCCTCAATGGGCAGAGTAGTGGAGATGCTTCAAGGACATGTTGACGCCTCAGAGATCTTCACAGCATAG 1806 0.4037 MITQTVIFLTLLISFYFLVFGFSPKPDFARVQHLRYRYFYNRNSKVISDPSYELVCDKNKSVLYLNYGRQLVEAIYATNSTTTLQSITAGNDINNCSAITRTYDNFTHVFSSAKEMELSDKNYRFSVGEVVFVSCKNPVLSPLNENIVALCSAEEPEAQYSYMLKHYPRASDVGESCKIDLMVKMVPWGPMTCNEKCSYQKLESEVVKGIHIKWRADRCGVANGGEPNCWLENATNMILCHQDAGHPISAMLMESSLYYSITVALWFAAKFAFGFPIFVGFLIYKMRRRHLSEYDDIEDFLRSHSNLVPIKYSYSDIRRMTKNFKHKLGEGGYGSVYKGKLRSKRDVAVKLLGKSTTDGHDFINEVSTIGTIRHVNVVQLIGFCAERRKQALVYEFMPNGSLDKYILSQHEKSSINYEKINEISLGVARGIEYLHQGCDKQILHFDIKPHNILLDENFSPKISDFGLAKLYPTDKSIVSLTAARGTMGYMAPELLYKNIGGISHKADVYSFGMMLMEMAGRRKNYDVVQNSWQTYFAKWVHDQFEETIFKSNATEEEKKIAQKMITVAFTCIQLSPSDRPSMGRVVEMLQGHVDASEIFTA 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4240g00006 601 FunFam serine/threonine-protein kinase PBS1-like 292 396 - -
Pral4240g00006 601 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Pral4240g00006 601 Gene3D Phosphorylase Kinase; domain 1 300 396 - -
Pral4240g00006 601 SUPERFAMILY Protein kinase-like (PK-like) 303 589 IPR011009 -
Pral4240g00006 601 ProSiteProfiles Protein kinase domain profile. 322 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4240g00006 601 Pfam Protein kinase domain 325 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4240g00006 601 FunFam PR5-like receptor kinase 397 599 - -
Pral4240g00006 601 SMART serkin_6 322 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4240g00006 601 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Pral4240g00006 601 Gene3D Transferase(Phosphotransferase) domain 1 397 598 - -
Pral4240g00006 601 PANTHER RUST RESISTANCE KINASE LR10-RELATED 294 593 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4240g00006 Pral-Chr4240 37269 41304 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4240g00006 311 598 Receptor kinase-like Gene Family AT5G38280 51.515 1.96e-102 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral4240g00006 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4240g00006 - - tpra:123914142 551.206