Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4240g00004 ATGAAGCACTCCTACTCAGAGATCAACAAATTGACTAATGGCTTCAAACACAAGTTAGGTGAAGGACGCTATGGTCATGTCTTCCAAGGAAAGCTTCAAAGCAAACGTGATGTAGCTGTCAAGATATTACATCTTGACATTAAACCTCACAATATCCTTCTTGATGAAAATTTCGATAAAAAAGTTTCTGATTTTGGATTGTCAAAGTTGTATTCCTTAGATGATAGCATTGTATCTCTAACTAATGCAAGAGGAACACTGGGATACAAGGCACCTGAATTATTTTACAAGAACATTGGAGGGATATCACATAAAGCTGATGTTTATAGTATTGGGATGCTGTTCATGGAAATGGCAGGTAGGAGGAAGAACTTGAATGTTATTGAGCATTCTTGGCAAACCCATTTTGCCAAATGGGTTTATGACCAATTTGAAGAATCCATAGAAGTGAGTGGTACCACCGGAGAGGAAAGGGAAATTGCGATGAAGATGATTGTTATAGCTTCACATTGCATACAAATGAATCCTAGTGATCCACCCTCAATGAAGAAAGTGATAGAGATGCTCGAGGGAGAAATTGACCTCCAAGTGGCTTTTCCACCGTACCAACCCTCTATAACTTGGAAAGGGATTCCAAAAGGGGATGTTGAATTGTTGATATATAATTGGAAGAATTTGAATTCAGAATGA 690 0.3812 MKHSYSEINKLTNGFKHKLGEGRYGHVFQGKLQSKRDVAVKILHLDIKPHNILLDENFDKKVSDFGLSKLYSLDDSIVSLTNARGTLGYKAPELFYKNIGGISHKADVYSIGMLFMEMAGRRKNLNVIEHSWQTHFAKWVYDQFEESIEVSGTTGEEREIAMKMIVIASHCIQMNPSDPPSMKKVIEMLEGEIDLQVAFPPYQPSITWKGIPKGDVELLIYNWKNLNSE 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4240g00004 229 SMART serkin_6 13 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4240g00004 229 ProSiteProfiles Protein kinase domain profile. 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4240g00004 229 PANTHER RUST RESISTANCE KINASE LR10-RELATED 3 43 IPR045874 GO:0004672
Pral4240g00004 229 ProSitePatterns Serine/Threonine protein kinases active-site signature. 42 54 IPR008271 GO:0004672|GO:0006468
Pral4240g00004 229 SUPERFAMILY Protein kinase-like (PK-like) 4 207 IPR011009 -
Pral4240g00004 229 ProSitePatterns Protein kinases ATP-binding region signature. 19 41 IPR017441 GO:0005524
Pral4240g00004 229 Gene3D Transferase(Phosphotransferase) domain 1 31 197 - -
Pral4240g00004 229 Pfam Protein kinase domain 41 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4240g00004 Pral-Chr4240 25964 26929 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4240g00004 2 45 Receptor kinase-like Gene Family AT5G38280 53.333 2.22e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral4240g00004 Pkinase 5.6e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4240g00004 - - tpra:123914142 229.95