Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4240g00001 ATGGGAAGTCCTCATTTTGGGGACCCCAACACAGAGTTCCATGCATATACCAACTTCAAGGTACCTAAACAAATTGCCTATTGGTTTGCAGCAAAATTTGCTTTGGGATTCCCAATTTTTGTGGGGTTTCTAATATATAAAATGAGAAGGAGGCATTTATCTGAGTATGATGACATTGAGGACTTCCTACGAAGTCACAGCAATTTAGTGCCCATCAAATACTCTTACTCTGACATAAGAAGAATGACAAAAAATTTCAAGCATAAGTTAGGAGAAGGGGGTTATGGTTCTGTATATAAAGGAAAGCTTCGAAGCAAGCGTGATGCGGCTGTTAAGCTATTAGGCAAGTCAACAACGGATGGGCATGATTTCATCAATGAAGTTTCCACCATTGGAACTATTCGTCATGTAAATGTGGTGCAACTGATAGGATTTTGTGCAGAGAGAAGAAAGCAAGCTCTTGTTTATGAGTTCATGCCAAACGGATCTTTAGATAAATACATACTTTCTGAGCATGAAAAATCATCAATAAATTATGAGAAGATCAATGAGATTTCTTTAGGGGTGGCTCGTGGGATTGAGTACCTACATCAAGGTTGCGACAAGCAAATCCTACACTTTGATATCAAACCTCACAATATTCTTCTTGATGAGAATTTTTCTCCCAAGATTTCAGACTTTGGATTGGCAAAACTATATCCAACAGATAAAAGTATTGTGTCTCTAACTGCAGCTAGAGGCACAATGGGATACATGGCTCCTGAATTGCTGTATAAAAACATTGGAGGCATCTCACACAAGGCTGATGTTTATAGTTTTGGGATGATGCTGATGGAAATGGCAGGAAGAAGAAAGAACTATGATGTTGTGCAGAATTCGTGGCAGACTTACTTTGCGAAATGGGTTCATGATCAGTTTGAAGAAACAATATTTAAAAGCAATGCCACAGAAGAAGAGAAGAAGATAGCCCAGAAAATGATTACAGTTGCTTTTACTTGCATACAGCTGAGCCCAAGTGATCGCCCCTCAATGAGCAGAGTAGTGGAGATGCTTCAAGGAGATGTTGATGTCTCAGAGATCTTCAGAGCATAG 1092 0.3929 MGSPHFGDPNTEFHAYTNFKVPKQIAYWFAAKFALGFPIFVGFLIYKMRRRHLSEYDDIEDFLRSHSNLVPIKYSYSDIRRMTKNFKHKLGEGGYGSVYKGKLRSKRDAAVKLLGKSTTDGHDFINEVSTIGTIRHVNVVQLIGFCAERRKQALVYEFMPNGSLDKYILSEHEKSSINYEKINEISLGVARGIEYLHQGCDKQILHFDIKPHNILLDENFSPKISDFGLAKLYPTDKSIVSLTAARGTMGYMAPELLYKNIGGISHKADVYSFGMMLMEMAGRRKNYDVVQNSWQTYFAKWVHDQFEETIFKSNATEEEKKIAQKMITVAFTCIQLSPSDRPSMSRVVEMLQGDVDVSEIFRA 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4240g00001 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Pral4240g00001 363 Gene3D Transferase(Phosphotransferase) domain 1 159 359 - -
Pral4240g00001 363 SMART serkin_6 84 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4240g00001 363 ProSiteProfiles Protein kinase domain profile. 84 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4240g00001 363 Pfam Protein kinase domain 87 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4240g00001 363 SUPERFAMILY Protein kinase-like (PK-like) 65 351 IPR011009 -
Pral4240g00001 363 Gene3D Phosphorylase Kinase; domain 1 61 158 - -
Pral4240g00001 363 FunFam serine/threonine-protein kinase PBS1-like 54 158 - -
Pral4240g00001 363 FunFam PR5-like receptor kinase 159 361 - -
Pral4240g00001 363 ProSitePatterns Protein kinases ATP-binding region signature. 90 112 IPR017441 GO:0005524
Pral4240g00001 363 PANTHER RUST RESISTANCE KINASE LR10-RELATED 56 355 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4240g00001 Pral-Chr4240 2734 4321 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4240g00001 73 360 Receptor kinase-like Gene Family AT5G38280 50.842 1.04e-104 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral4240g00001 Pkinase 5.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4240g00001 - - tpra:123914142 489.574