Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4239g00002 ATGTTCATTGGTGAGCTTCGTGGATTTTTATCTCGACTTCTCTTGGAGGTACTTGGATACAGTTGCCTATTGGTTTGCAGCAAAATTTGCTTTGGGATTCCCAATTTTGTGGGGTTTCTAATATATAAAATGAGAAGGAGGCATTTATCTGAGTATGATGACATTGAGGACTTCCTACGAAGTCACAGCAATTTAGTGCCCATCAAATACTCTTACTCTGACATAAGAAGAATGACAAAAAATTTCAAGCATAAGTTAGGAGAAGGGGGTTATGGTTCTGTATATAAAGGAAAGCTTCGAAGCAAGCGTGATGCGGCTGTTAAGCTATTAGGCAAGTCAACAACGGATGGGCATGATTTCATCAATGAAGTTTCCACCATTGGAACTATTCGTCATGTAAATGTGGTGCAACTGATAGGATTTTGTGCAGAGAGAAGAAAGCAAGCTCTTGTTTATGAGTTCATGCCAAACGGATCTTTAGATAAATACATACTTTCTGAGCATGAAAAATCATCAATAAATTATGAGAAGATCAATGAGATTTCTTTAGGGGTGGCTCGTGGGATTGAGTACCTACATCAAGGTTGCGACAAGCAAATCCTACACTTTGATATCAAACCTCACAATATTCTTCTTGATGAGAATTTTTCTCCCAAGATTTCAGACTTTGGATTGGCAAAACTATATCCAACAGATAAAAGTATTGTGTCTCTAACTGCAGCTAGAGGCACAATGGGATACATGGCTCCTGAATTGCTGTATAAAAACATTGGAGGCATCTCACACAAGGCTGATGTTTATAGTTTTGGGATGATGCTGATGGAAATGGCAGGAAGAAGAAAGAACTATGATGTTGTGCAGAATTCGTGGCAGACTTACTTTGCGAAATGGGTTCATGATCAGTTTGAAGAAACAATATTTAAAAGCAATGCCACAGAAGAAGAGAAGAAGATAGCCCAGAAAATGATTACAGTTGCTTTTACTTGCATACAGCTGAGCCCAAGTGATCGCCCCTCAATGAGCAGAGTAGTGGAGATGCTTCAAGGAGATGTTGATGTCTCAGAGATCTTCAGAGCATAG 1080 0.3917 MFIGELRGFLSRLLLEVLGYSCLLVCSKICFGIPNFVGFLIYKMRRRHLSEYDDIEDFLRSHSNLVPIKYSYSDIRRMTKNFKHKLGEGGYGSVYKGKLRSKRDAAVKLLGKSTTDGHDFINEVSTIGTIRHVNVVQLIGFCAERRKQALVYEFMPNGSLDKYILSEHEKSSINYEKINEISLGVARGIEYLHQGCDKQILHFDIKPHNILLDENFSPKISDFGLAKLYPTDKSIVSLTAARGTMGYMAPELLYKNIGGISHKADVYSFGMMLMEMAGRRKNYDVVQNSWQTYFAKWVHDQFEETIFKSNATEEEKKIAQKMITVAFTCIQLSPSDRPSMSRVVEMLQGDVDVSEIFRA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4239g00002 359 PANTHER RUST RESISTANCE KINASE LR10-RELATED 52 351 IPR045874 GO:0004672
Pral4239g00002 359 ProSiteProfiles Protein kinase domain profile. 80 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4239g00002 359 SUPERFAMILY Protein kinase-like (PK-like) 61 347 IPR011009 -
Pral4239g00002 359 FunFam PR5-like receptor kinase 155 357 - -
Pral4239g00002 359 Gene3D Transferase(Phosphotransferase) domain 1 155 355 - -
Pral4239g00002 359 Pfam Protein kinase domain 83 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4239g00002 359 Gene3D Phosphorylase Kinase; domain 1 44 154 - -
Pral4239g00002 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Pral4239g00002 359 ProSitePatterns Protein kinases ATP-binding region signature. 86 108 IPR017441 GO:0005524
Pral4239g00002 359 FunFam serine/threonine-protein kinase PBS1-like 50 154 - -
Pral4239g00002 359 SMART serkin_6 80 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4239g00002 Pral-Chr4239 40910 44284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4239g00002 69 356 Receptor kinase-like Gene Family AT5G38280 50.842 2.27e-104 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral4239g00002 Pkinase 5.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4239g00002 - - tpra:123914142 480.715