Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4235g00016 ATGGGGTTTCCACTTTTTGTTCTTGATCATGTTCTCGTTGCTATTCTTCTTGCTGCACAATTAATGAAAACGCTTGTCATGGCTCAAGATAGTCTTCTTGGTAACCCTGCGGAGAAAGATGCTCTTTATGGTCTCAAGGCCACTTTCAATGACCCTTTTCTGAATAATAACTGGACTGGCTTCCCTTGCAATGAGACTGAACCGTCAAGATGGTTTGGGGTTCAGTGTACCAGTGGTCGAGTCACTGGGATAGTACTGGAAGGCATGGAGCTAACAGGAAAAATCGATGTCAAGGCATTCTTTAATCTTACAGAATTGTCTATTCTGAGCTTCAAGAACAATTCCCTGAAGGGAAATGTGATGGATTTCTCGGAGAATCATCACCTGAAGTATATTGATTTGTCAGGCAATGAGTTTGATGGGGCAATACCAAGATCCCTTCTGAATCTTAACTTCTTGGAAGCGTTGTTGCTGCAAGATAATAAGCTCACAGGTCCGGTTCCGGAGTTCAGTCAACCAAGTTTGAAGATGATCAATGTGTCAGGCAATGATCTTCATGGCAGAATCAGAGTAACTCAAACTGTTCGATTACTGGGGCCTCATTCATTTTCTGGCAACCCCAGATTATATGGTCCTCCTCTCAATTCCTGCAGCTCCAGCTTGAAAGCTGCAATTCCAGCAGCACCAACAGACGACCCAGAAAACGATGAGGCCCAGAACCAGACTGGATCGTCAAAGAAAGATAACACTTCCACTATTCTAATCATTTTCAATGTGGTTCTCCTGTTTGCAATAATCTTTCTAGCTTTTCTTTACTACAAGACAGTTAAGAAGCTCAACAATATTATGAAGCAGCAGATTCCCATTATTGATAGAGATGTGGCGGAGAGTACTGTCGATAAGGTCGAAATGAGAAATCATCACAGTCCAGTGGTGATGGCAGTAGAAGAGAAGAGGGAGCTTATATTCTTTACGGATGAACCAAAGTTTCAAATGAATGAACTCTTAAAAGCTTCTGCAGAGGCCCTGGGTCAGGGAATCATGGGGAACAGTTATAAGGCTATGCTGAATGGAGGAGGTTCCGTTGTTGTGAAGAGGCTAAGGGACCTGAGGCCAATGACAAGAGAGGACTTTGCAAAGCAATTGCATAGAATTGCTGATTTGAGGCATCCGAATTTGTTGCCTTTGCTTGCTTACTACATTTCCAGAGATGAGAGGTTGCTGCTCTACAGATATGCAGAGAAGGGAAATCTTTTCTTCAGGCTGCACGGAAACAGAAGTGGAAACCGGATTCCATTCACATGGAACTCAAGATTATCAGTGGCAAAAGGGGTAGCCCGAGGATTAACTTACCTTCATCTCAATGCCAAGCCCAATAGCACCATGGCTCCCCATGGAAACTTGAAGTCCTCAAATGTCCTGCTAGATGAAAACGACACAGTTCTCATCTCTGACTACGGACTTTCCTCCCTCATAGCACAACCCATTGCAGCTCAACGAATGGTCGTTTACAAATCACCCGAATATGGGTACTCAAGAAAAGTATCAAAGCAATCTGATGTCTGGAGCTATGGAAGCCTTCTCATAGAACTTCTAACAGGCAGATTATCTGTGTGTTCAGCCCCAACCGGGGTTACCGGGTCGGATCTCTGTAGTTGGGTCCACCGAGCAGTGAGGGAAGAATGGACGGCGGAGATATTCGATAGGGAAATTTCTGTGCAGAGAAATGCACTTCCTGGGATGCTGAGATTGCTTCAGATCGCGATGCGTTGCACCGATAGGTTCCCTGAGAATCGGCCAGACATGAGGGAGGTGGTGAGAGAAGTAGAGAAGATTGAGGTGGTTCCATTGATGTCGGAAGATGAAGAAGATGCATCTGGAGATAGATCTATAACAGATGATTCGCTCTACTCAACCAGTACTACCTCAGGGATTATTGGAGATGACAGGTAG 1953 0.446 MGFPLFVLDHVLVAILLAAQLMKTLVMAQDSLLGNPAEKDALYGLKATFNDPFLNNNWTGFPCNETEPSRWFGVQCTSGRVTGIVLEGMELTGKIDVKAFFNLTELSILSFKNNSLKGNVMDFSENHHLKYIDLSGNEFDGAIPRSLLNLNFLEALLLQDNKLTGPVPEFSQPSLKMINVSGNDLHGRIRVTQTVRLLGPHSFSGNPRLYGPPLNSCSSSLKAAIPAAPTDDPENDEAQNQTGSSKKDNTSTILIIFNVVLLFAIIFLAFLYYKTVKKLNNIMKQQIPIIDRDVAESTVDKVEMRNHHSPVVMAVEEKRELIFFTDEPKFQMNELLKASAEALGQGIMGNSYKAMLNGGGSVVVKRLRDLRPMTREDFAKQLHRIADLRHPNLLPLLAYYISRDERLLLYRYAEKGNLFFRLHGNRSGNRIPFTWNSRLSVAKGVARGLTYLHLNAKPNSTMAPHGNLKSSNVLLDENDTVLISDYGLSSLIAQPIAAQRMVVYKSPEYGYSRKVSKQSDVWSYGSLLIELLTGRLSVCSAPTGVTGSDLCSWVHRAVREEWTAEIFDREISVQRNALPGMLRLLQIAMRCTDRFPENRPDMREVVREVEKIEVVPLMSEDEEDASGDRSITDDSLYSTSTTSGIIGDDR 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4235g00016 650 Pfam Protein tyrosine and serine/threonine kinase 341 608 IPR001245 GO:0004672|GO:0006468
Pral4235g00016 650 Gene3D Phosphorylase Kinase; domain 1 303 412 - -
Pral4235g00016 650 MobiDBLite consensus disorder prediction 619 650 - -
Pral4235g00016 650 MobiDBLite consensus disorder prediction 225 246 - -
Pral4235g00016 650 MobiDBLite consensus disorder prediction 631 650 - -
Pral4235g00016 650 SUPERFAMILY Protein kinase-like (PK-like) 341 616 IPR011009 -
Pral4235g00016 650 Gene3D Ribonuclease Inhibitor 35 219 IPR032675 -
Pral4235g00016 650 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 613 IPR046959 -
Pral4235g00016 650 SUPERFAMILY L domain-like 37 209 - -
Pral4235g00016 650 Gene3D Transferase(Phosphotransferase) domain 1 414 631 - -
Pral4235g00016 650 ProSiteProfiles Protein kinase domain profile. 337 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4235g00016 Pral-Chr4235 152523 155321 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4235g00016 54 635 Receptor kinase-like Gene Family AT5G58300 35.726 1.07e-100 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral4235g00016 PK_Tyr_Ser-Thr 2.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4235g00016 - - pcin:129284917 1067.37