Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4235g00006 ATGGACGTTTTATCCTTCAGATCATCCCTAATTTTTCCCTATAGGCCCTCCCATGGCTTTAATCCACTCTCAAAAAATTTGCAAACCCAAAAGCTTCATCCTTCGCATGTTTCATGCAGAGCAAGAAAGTTAGCTATTGAGGTAGAAGAAACAACTTCCGTCGATTTTTACAAGATGCTATCTCTGAATCCGAAGAGTGCAACCAAAGATGAGATAAAGAAGGCATATAGATCAATGGCACTTCAATACCACCCAGACACGTGCTTAGATCCTTTGAGGAAGGAGAAATGTACGAGGATGTTTGTACAGCTCCATGCAGCTTATAAGACATTATCAGACCCAGTGCTCCGAGAAGAGTATGATTATGAGCTTGACTTGATGACAAGCAAGAGGAATAAGAATAAGAGTGTTAACGGCGGTGATGAAAGATGGAGAAGAAGGTGGGAAGAGCAATTAGTTGAGTTGAAGAGAAGGTCTAATACAAGAATGGCTCAAAAGGAAGGATCATCATGGGGTAGTAGAATGAGGGCTCAAAACATGAAAAATCATAAATAA 555 0.4036 MDVLSFRSSLIFPYRPSHGFNPLSKNLQTQKLHPSHVSCRARKLAIEVEETTSVDFYKMLSLNPKSATKDEIKKAYRSMALQYHPDTCLDPLRKEKCTRMFVQLHAAYKTLSDPVLREEYDYELDLMTSKRNKNKSVNGGDERWRRRWEEQLVELKRRSNTRMAQKEGSSWGSRMRAQNMKNHK 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4235g00006 184 CDD DnaJ 55 113 IPR001623 -
Pral4235g00006 184 MobiDBLite consensus disorder prediction 157 184 - -
Pral4235g00006 184 Gene3D DnaJ domain 42 151 IPR036869 -
Pral4235g00006 184 Pfam DnaJ domain 55 121 IPR001623 -
Pral4235g00006 184 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 30 182 - -
Pral4235g00006 184 SUPERFAMILY Chaperone J-domain 51 125 IPR036869 -
Pral4235g00006 184 PRINTS DnaJ domain signature 58 76 IPR001623 -
Pral4235g00006 184 PRINTS DnaJ domain signature 76 91 IPR001623 -
Pral4235g00006 184 PRINTS DnaJ domain signature 96 116 IPR001623 -
Pral4235g00006 184 ProSiteProfiles dnaJ domain profile. 55 124 IPR001623 -
Pral4235g00006 184 SMART dnaj_3 54 116 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4235g00006 Pral-Chr4235 30654 31208 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4235g00006 57 121 C2H2 Transcription Factor Family AT1G74250 40.299 3.20e-07 47.8