Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4235g00005 ATGGACGTTTTATCCTTAAGTTCAACCCTATTTCCCAATAGGTCCTCTCATGGCCTTAATCCTCTCTCAAAAAAGTGGCAAAGCCAGGGGCTTAGTGTTTCATGTAGAGCTAGAAAGCTAGATATTGAGGTTGAAGAGACAAATCCCGAAAACTTTTACAAGATGCTATCTTTGAATCCCAAAAGTGCAACAAAAGATGAAATAAAGAAGGCTTATAGATCGATGGCACTTCAGTACCACCCAGACACGTGCCGAGACCCTTCAAGGAAGGAGAAGTGTACGAGGATGTTTGTGCAACTCCATGCAGCTTATGAGACATTATCAGATCCAGTGCTTCGAGAAGAGTATGATTATGAACTCGGCTTGATCACAAAAAAGAGTAATAATGAGAGTGTCAATGGAGGTGAAAGATGGAGAAGAAGGTGGGAAGAGCAAGTGGTTGAGTTGAAGAGAAGGTCTGATACAAGGATGTCTCAAAAGGAAAAATCATCATGGGCTAGTAGAATTAGGGCTCAAAACATGAAAAATCATAGCTGA 537 0.4115 MDVLSLSSTLFPNRSSHGLNPLSKKWQSQGLSVSCRARKLDIEVEETNPENFYKMLSLNPKSATKDEIKKAYRSMALQYHPDTCRDPSRKEKCTRMFVQLHAAYETLSDPVLREEYDYELGLITKKSNNESVNGGERWRRRWEEQVVELKRRSDTRMSQKEKSSWASRIRAQNMKNHS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4235g00005 178 MobiDBLite consensus disorder prediction 148 178 - -
Pral4235g00005 178 Pfam DnaJ domain 51 117 IPR001623 -
Pral4235g00005 178 CDD DnaJ 51 109 IPR001623 -
Pral4235g00005 178 ProSiteProfiles dnaJ domain profile. 51 120 IPR001623 -
Pral4235g00005 178 SUPERFAMILY Chaperone J-domain 16 116 IPR036869 -
Pral4235g00005 178 MobiDBLite consensus disorder prediction 164 178 - -
Pral4235g00005 178 MobiDBLite consensus disorder prediction 148 163 - -
Pral4235g00005 178 Gene3D DnaJ domain 42 147 IPR036869 -
Pral4235g00005 178 ProSitePatterns Nt-dnaJ domain signature. 97 116 IPR018253 -
Pral4235g00005 178 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 23 176 - -
Pral4235g00005 178 PRINTS DnaJ domain signature 54 72 IPR001623 -
Pral4235g00005 178 PRINTS DnaJ domain signature 92 112 IPR001623 -
Pral4235g00005 178 PRINTS DnaJ domain signature 72 87 IPR001623 -
Pral4235g00005 178 SMART dnaj_3 50 112 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4235g00005 Pral-Chr4235 27988 28524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4235g00005 48 128 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 38.095 4.39e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4235g00005 - - pvy:116125115 159.844