Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4235g00003 ATGAGTCACCGAATCAGCGATGAGGTGATAGAAAGGGTTACAGAGGAAATCAGAAGTGGGCATTCCTCTCGTCGACATGACAGGGCTTTGCCACATATCCACAAGGTGGGTACTCCTCCTAAGCAAAATGTTCTCAAAGAGATCAAAGAAACTGCAATGGAAACTTTCTTCGCAGACAAGCCCCTAAGCCACTTTAAGGGCCAACCTGCATCGAGAAAGTTGGTTCTTGGCCTGCAAGCAGTGTTCCCCATCCTTCAATGGGGAAGAGGTTACGATCTTAGTAAATTTAAAGGGGATCTCGTTGCTGGACTTACCATTGCAAGTCTCTGTATTCCTCAGGATATTGCATATGCAAAGCTTGCAAATTTGAAGCCACAGTATGGACTCTACTCCAGCTTTGTGGCTCCTCTTATCTATGCTTTTATGGGAAGCTCAAGAGATATAGCCATAGGACCAGTGGCTGTGGTATCCCTTTTGCTTGGAACTATGCTGACGGATCAGATCAGTGACTTTGAAAGTCATGACTATCTTCGTCTTGCATTCACTGCCACCTTTTTTGCTGGAATCACTCAAATGGCACTTGGATTTCTCAGGCTTGGTTTCCTGATTGACTTCTTGTCTCACGCTGCCATTGTGGGATTCATGGCCGGAGCTGCCATTACTATAGCCTTGCAACAGCTTAAAGGATTGCTTGGCATAAAAAACTTCACCAAGAAAAGTGACATAATTTCTGTCATGCGCTCAGTTTGGACTAACGTGCACCATGGGTGGAATTGGCAGACGATAGTCATTGGGTTAGCATTCTTGGCTTTCCTCCTTACAGCCAAGTACCTGGCTAAAAAGAATAAGAAACTGTTTTGGCTATCTGCACTTGCTCCTTTGGCGTCTGTTATAGTGTCCACCTTTTTTGTTTACATCACCCGTGCAGACAAGGAAGGCGTTGCAATTGTGACACACATAGAGAAGGGAGTGAATCCAATATCTGCCGGTGATATTTTCTTCAGTGGAAAATATCTTGGCCCTGGTATTCAGATTGGCGTGATAGCTGGTTTGATTGCACTCACAGAAGCTGTGGCAATTGGGAGAACATTTGCTGCCATGAAAGATTATTCAGTTGATGGTAACAGAGAAATGGTGGCCATGGGAACAATGAATCTTATTGGTTCACTGACATCTTGTTATGTATCCACAGGATCTTTTTCACGCTCAGCAGTGAACTACATGGCTGGCTGTCAAACTGCTGTGTCAAACATCGTTATGTCCATCGTTGTGTTATTAACCTTAGTGTTCATTACACCACTGTTTAAGTACACCCCAAATGCAGTGCTTGCTTCTATTATAATAGTAGCTGTGATAGGCCTCATTGACATTGATGCAGTCGTTCTGCTATGGAAGATTGACAAGTTTGATTTTCTAGCCTGCATGGGAGCCTTCTTTGGCGTGATTTTCAAAAATGTTGAGATTGGCCTTCTTATCGCGGTGGTCATATCCTTTGCTAAAATCCTTTTACAAGTGACAAGGCCGAGGACAGTAGCACTTGGGAAGCTTCCAGGGACCAAGGTATACAGGAACATCTATCAATACCCAAGTGCTAGACAGATCCCCGGAATGCTAATTATTAGAGTTGACTCTGCAATCTACTTCTCAAACTCTAATTATATCAAGGACAGAATTCTGAGATGGCTGCAAGATGAAGATGAAGGAAGGAAAGAAAGTAGTTTTCCCACAATAGAATATCTGATTGTTGAAATGTCACCTGTTACTGACATTGACACTAGTGGCATCCACGCCTTTGAAGATCTATACAAGAGCCTACAGAAAAGAGGGGTCCAGGTAATACATACTTTCTGTTCTTGA 1857 0.4335 MSHRISDEVIERVTEEIRSGHSSRRHDRALPHIHKVGTPPKQNVLKEIKETAMETFFADKPLSHFKGQPASRKLVLGLQAVFPILQWGRGYDLSKFKGDLVAGLTIASLCIPQDIAYAKLANLKPQYGLYSSFVAPLIYAFMGSSRDIAIGPVAVVSLLLGTMLTDQISDFESHDYLRLAFTATFFAGITQMALGFLRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGLLGIKNFTKKSDIISVMRSVWTNVHHGWNWQTIVIGLAFLAFLLTAKYLAKKNKKLFWLSALAPLASVIVSTFFVYITRADKEGVAIVTHIEKGVNPISAGDIFFSGKYLGPGIQIGVIAGLIALTEAVAIGRTFAAMKDYSVDGNREMVAMGTMNLIGSLTSCYVSTGSFSRSAVNYMAGCQTAVSNIVMSIVVLLTLVFITPLFKYTPNAVLASIIIVAVIGLIDIDAVVLLWKIDKFDFLACMGAFFGVIFKNVEIGLLIAVVISFAKILLQVTRPRTVALGKLPGTKVYRNIYQYPSARQIPGMLIIRVDSAIYFSNSNYIKDRILRWLQDEDEGRKESSFPTIEYLIVEMSPVTDIDTSGIHAFEDLYKSLQKRGVQVIHTFCS 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4235g00003 618 CDD STAS_SulP_like_sulfate_transporter 528 613 - -
Pral4235g00003 618 ProSiteProfiles STAS domain profile. 527 618 IPR002645 -
Pral4235g00003 618 Gene3D STAS domain 507 618 IPR036513 -
Pral4235g00003 618 SUPERFAMILY SpoIIaa-like 528 615 IPR036513 -
Pral4235g00003 618 PANTHER SULFATE TRANSPORTER 47 615 IPR001902 GO:0016020|GO:0055085
Pral4235g00003 618 NCBIfam sulfate permease 83 614 IPR001902 GO:0016020|GO:0055085
Pral4235g00003 618 ProSitePatterns SLC26A transporters signature. 125 146 IPR018045 GO:0008271|GO:0008272
Pral4235g00003 618 Pfam STAS domain 528 613 IPR002645 -
Pral4235g00003 618 Pfam Sulfate permease family 96 475 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4235g00003 Pral-Chr4235 10597 15272 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4235g00003 34 613 Inorganic Solute Cotransporters AT4G08620 71.601 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4235g00003 K17470 - gmx:100784124 954.896