Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4235g00002 ATGAGTCACCGAATCAGCGATGAGGTGATAGAAAGGGTTACAGAGGAAATCAGAAGTGGGCATTCCTCTCGTCGACATGACAGGGCTTTGCCACATATCCACAAGGTGGGTACTCCTCCTAAGCAAAATGTTCTCAAAGAGATCAAAGAAACTGCAATGGAAACTTTCTTCGCAGACAAGCCCCTAAGCCACTTTAAGGGCCAACCTGCATCGAGAAAGTTGGTTCTTGGCCTGCAAGCAGTGTTCCCCATCCTTCAATGGGGAAGAGGTTACGATCTTAGTAAATTTAAAGGGGATCTCGTTGCTGGACTTACCATTGCAAGTCTCTGTATTCCTCAGGATATTGCATATGCAAAGCTTGCAAATTTGAAGCCACAGTATGGACTCTACTCCAGCTTTGTGGCTCCTCTTATCTATGCTTTTATGGGAAGCTCAAGAGATATAGCCATAGGACCAGTGGCTGTGGTATCCCTTTTGCTTGGAACTATGCTGACGGATCAGATCAGTGACTTTGAAAGTCATGACTATCTTCGTCTTGCATTCACTGCCACCTTTTTTGCTGGAATCACTCAAATGGCACTTGGATTTCTCAGGCTTGGTTTCCTGATTGACTTCTTGTCTCACGCTGCCATTGTGGGATTCATGGCCGGAGCTGCCATTACTATAGCCTTGCAACAGCTTAAAGGATTGCTTGGCATAAAAAACTTCACCAAGAAAAGTGACATAATTTCTGTCATGCGCTCAGTTTGGACTAACGTGCACCATGGGTGGAATTGGCAGACGATAGTCATTGGGTTAGCATTCTTGGCTTTCCTCCTTACAGCCAAGTACCTGGCTAAAAAGAATAAGAAACTGTTTTGGCTATCTGCACTTGCTCCTTTGGCGTCTGTTATAGTGTCCACCTTTTTTGTTTACATCACCCGTGCAGACAAGGAAGGCGTTGCAATTGTGACACACATAGAGAAGGGAGTGAATCCAATATCTGCCGGTGATATTTTCTTCAGTGGAAAATATCTTGGCCCTGGTATTCAGATTGGCGTGATAGCTGGTTTGATTGCACTCACAGAAGCTGTGGCAATTGGGAGAACATTTGCTGCCATGAAAGATTATTCAGTTGATGGTAACAGAGAAATGGTGGCCATGGGAACAATGAATCTTATTGGTTCACTGACATCTTGTTATGTATCCACAGGATCTTTTTCACGCTCAGCAGTGAACTACATGGCTGGCTGTCAAACTGCTGTGTCAAACATCGTTATGTCCATCGTTGTGTTATTAACCTTAGTGTTCATTACACCACTGTTTAAGTACACCCCAAATGCAGTGCTTGCTTCTATTATAATAGTAGCTGTGATAGGCCTCATTGACATTGATGCAGTCGTTCTGCTATGGAAGATTGACAAGTTTGATTTTCTAGCCTGCATGGGAGCCTTCTTTGGCGTGATTTTCAAAAATGTTGAGATTGGCCTTCTTATCGCGGTGGTCATATCCTTTGCTAAAATCCTTTTACAAGTGACAAGGCCGAGGACAGTAGCACTTGGGAAGCTTCCAGGGACCAAGGTATACAGGAACATCTATCAATACCCAAGTGCTAGACAGATCCCCGGAATGCTAATTATTAGAGTTGACTCTGCAATCTACTTCTCAAACTCTAATTATATCAAGGACAGAATTCTGAGATGGCTGCAAGATGAAGATGAAGGAAGGAAAGAAAGTAGTTTTCCCACAATAGAATATCTGATTGTTGAAATGTCACCTGTTACTGACATTGACACTAGTGGCATCCACGCCTTTGAAGATCTATACAAGAGCCTACAGAAAAGAGGGGTCCAGCTTATCTTGTCAAATCCCGGGCCAATTGTAATGGAGAAGCTCTACGCATCCAAGTTAGTGGACATGATTGGGGAAGACAAGATATTTCTATCAGTAGGTGATGCTGTTGCAACTTATGGTTCAAAGGCTGATCAAGTTTGA 1974 0.4341 MSHRISDEVIERVTEEIRSGHSSRRHDRALPHIHKVGTPPKQNVLKEIKETAMETFFADKPLSHFKGQPASRKLVLGLQAVFPILQWGRGYDLSKFKGDLVAGLTIASLCIPQDIAYAKLANLKPQYGLYSSFVAPLIYAFMGSSRDIAIGPVAVVSLLLGTMLTDQISDFESHDYLRLAFTATFFAGITQMALGFLRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGLLGIKNFTKKSDIISVMRSVWTNVHHGWNWQTIVIGLAFLAFLLTAKYLAKKNKKLFWLSALAPLASVIVSTFFVYITRADKEGVAIVTHIEKGVNPISAGDIFFSGKYLGPGIQIGVIAGLIALTEAVAIGRTFAAMKDYSVDGNREMVAMGTMNLIGSLTSCYVSTGSFSRSAVNYMAGCQTAVSNIVMSIVVLLTLVFITPLFKYTPNAVLASIIIVAVIGLIDIDAVVLLWKIDKFDFLACMGAFFGVIFKNVEIGLLIAVVISFAKILLQVTRPRTVALGKLPGTKVYRNIYQYPSARQIPGMLIIRVDSAIYFSNSNYIKDRILRWLQDEDEGRKESSFPTIEYLIVEMSPVTDIDTSGIHAFEDLYKSLQKRGVQLILSNPGPIVMEKLYASKLVDMIGEDKIFLSVGDAVATYGSKADQV 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4235g00002 657 PANTHER SULFATE TRANSPORTER 47 650 IPR001902 GO:0016020|GO:0055085
Pral4235g00002 657 Pfam Sulfate permease family 96 475 IPR011547 GO:0016020
Pral4235g00002 657 SUPERFAMILY SpoIIaa-like 528 650 IPR036513 -
Pral4235g00002 657 Gene3D STAS domain 507 653 IPR036513 -
Pral4235g00002 657 NCBIfam sulfate permease 83 646 IPR001902 GO:0016020|GO:0055085
Pral4235g00002 657 FunFam Sulfate transporter 31 507 653 - -
Pral4235g00002 657 Pfam STAS domain 528 646 IPR002645 -
Pral4235g00002 657 ProSitePatterns SLC26A transporters signature. 125 146 IPR018045 GO:0008271|GO:0008272
Pral4235g00002 657 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Pral4235g00002 657 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4235g00002 Pral-Chr4235 10597 15534 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4235g00002 34 656 Inorganic Solute Cotransporters AT4G08620 71.200 0.0 905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4235g00002 K17470 - gmx:100784124 1020.76