Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4233g00019 ATGATCATCATCACTTTCATGTTCTGGTCGTCATGGTGGGCACTGAACGGCGTCGTTTCGGACCCGCAGACCAATCTTTTAAGAAAAGATTGCACTCCAGCTGGCATACTAGTGCTGCCCAACTTCTCCATCTTCAGTGACAACGTTAACGAAACGTTTGGAGAGATCAGAGAGCAGATTATGAGCATAAACAAGCACTTTGCGACGGCGCAGCAAGGTAATGGAGGAAACCCTGTTTTCAGTCTTTTTCAGTGCAGAAACTACCTCTCCGTTCATGACTGTGTTGGCTGCTTCGACGCCGCCGCCAAACAAGTCCGCAATTGCCCTGCTGCTTCGCCCGGCGGCCTTGTCGTCTACGACGGCTGCTTCCTCGGGTACGAGACCACCGGTGCTTTCCTTGAACAAACAACGGAGGATTTCAATGCCGTATCGTGTAGTAGCCAGACTATGACAGGATCCACTTCGTTTACCTCACTTGCGCAGCAAATGCTAAAGAGTCTCCAAACAACAGCACCCAAGAACCAAGGGTTCTTTGCAGCCACAAGGATAGAATTGCCTGATAATAGTACAACTATTTATGCCTTTGTTCAATGTACTGAAACTATCACTCAGACTGGATGCGTCAATTGCTTGAACACTGGCTATAACAATATGCCGACTTGTCTTCCCAATTCGGAGGGTAGGGCTTATGCTTACGGGTGCTTTATGAGATACTCCACTACTTCCTTCTTTCCAGATAATTACCAGACAATTCATATTACTTCCGAGGGCAAACAAGGTTCAAATAAGAAGGGGACCATTATAGGTGTAGTTGTTGGAGTTGTAGCTTTTGTTTTGATCCTCCTTACACTATTAGCTTGGATTAAACGACCGAAAAGGCCTGAAAGATCAGTTCCTAGAGGCGACATATCCGGAGTAAGTAAGTTGAAAGGCCCAATTAATTTTAGCTATAGAGAGTTGAAGTTTGCAACTAAAAGTTTCAGTGCAGAAAATAAAGTTGGAGAAGGAGGATTTGGTGCTGTATATAAGGGTACCCTGAAGAATGGGAAAGCAGTTGCTGTAAAGAAGTTAACCTTACACCAGTCTAAGAAGGTGGAAGAAGAATTTGAAAGTGAAGTGAAACTTATAAGTAATGTCCATCATCGGAATCTTATTCGGCTTCTTGGATGTTGCAGTAAAAGAAACGAGAGAATTCTTATTTATGAATATATGAAAAACACCAGTCTAGACAAATTCTTATTTGGTAAAAACAGAGGTTCTCTTAATTGGAAGCAACGGTATGATATAATTTTAGGAACAACAAGGGGTATAACTTATCTACATGAAGAATTTCATGTTCGTATCATACATAGAGATATAAAGGCTAACAACATTCTCTTAGATAATGATCTCCAACCAAGAATTGCTGATTTTGGCTTAGCAAAGCTTTCACCTGAAGAAAAATCTCATCTTAGTACAAAATTTGCTGGAACATTAGGATACACTGCATCAGAATATGCAATTCATGGTCAATTATTAGAAAAAGCTGACATTTATAGCTTTGGCATTGTACTCCTAGAAATTATCAGCGGTGAACAAGGCTTGGAAGCTATATGA 1596 0.4142 MIIITFMFWSSWWALNGVVSDPQTNLLRKDCTPAGILVLPNFSIFSDNVNETFGEIREQIMSINKHFATAQQGNGGNPVFSLFQCRNYLSVHDCVGCFDAAAKQVRNCPAASPGGLVVYDGCFLGYETTGAFLEQTTEDFNAVSCSSQTMTGSTSFTSLAQQMLKSLQTTAPKNQGFFAATRIELPDNSTTIYAFVQCTETITQTGCVNCLNTGYNNMPTCLPNSEGRAYAYGCFMRYSTTSFFPDNYQTIHITSEGKQGSNKKGTIIGVVVGVVAFVLILLTLLAWIKRPKRPERSVPRGDISGVSKLKGPINFSYRELKFATKSFSAENKVGEGGFGAVYKGTLKNGKAVAVKKLTLHQSKKVEEEFESEVKLISNVHHRNLIRLLGCCSKRNERILIYEYMKNTSLDKFLFGKNRGSLNWKQRYDIILGTTRGITYLHEEFHVRIIHRDIKANNILLDNDLQPRIADFGLAKLSPEEKSHLSTKFAGTLGYTASEYAIHGQLLEKADIYSFGIVLLEIISGEQGLEAI 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4233g00019 531 Pfam Protein kinase domain 328 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4233g00019 531 Gene3D Phosphorylase Kinase; domain 1 303 403 - -
Pral4233g00019 531 Gene3D Transferase(Phosphotransferase) domain 1 404 530 - -
Pral4233g00019 531 SUPERFAMILY Protein kinase-like (PK-like) 308 525 IPR011009 -
Pral4233g00019 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Pral4233g00019 531 ProSiteProfiles Gnk2-homologous domain profile. 138 243 IPR002902 -
Pral4233g00019 531 FunFam Cysteine-rich receptor-like protein kinase 2 294 403 - -
Pral4233g00019 531 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 404 529 - -
Pral4233g00019 531 ProSiteProfiles Gnk2-homologous domain profile. 25 131 IPR002902 -
Pral4233g00019 531 Pfam Salt stress response/antifungal 43 128 IPR002902 -
Pral4233g00019 531 Pfam Salt stress response/antifungal 145 240 IPR002902 -
Pral4233g00019 531 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524
Pral4233g00019 531 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 82 526 - -
Pral4233g00019 531 ProSiteProfiles Protein kinase domain profile. 327 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4233g00019 531 Gene3D - 137 243 IPR038408 -
Pral4233g00019 531 Gene3D - 30 130 IPR038408 -
Pral4233g00019 531 SMART serkin_6 327 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4233g00019 Pral-Chr4233 232737 239465 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4233g00019 6 526 Receptor kinase-like Gene Family AT1G70520 36.553 5.79e-102 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4233g00019 Pkinase 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4233g00019 - - pcin:129300003 696.812